INFO: No output directory specified (--dir)
INFO: Using directory: "Test_capillary_20261027_034308"
INFO: Regenerating c-file: Test_capillary.c
DEBUG: CMD: /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/bin/mcxtrace  -t -o ./Test_capillary.c Test_capillary.instr --verbose
mcxtrace version 3.99.99
Analyzing file            Test_capillary.instr
Embedding component Progress_bar from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/misc/Progress_bar.comp
Component[1]: Origin = Progress_bar().
Embedding library   read_table-lib.h
Embedding library   read_table-lib.c
Embedding component Source_flat from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/sources/Source_flat.comp
Component[2]: generic_source = Source_flat().
Embedding component PSD_monitor from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/monitors/PSD_monitor.comp
Component[3]: psd_pre = PSD_monitor().
Embedding component E_monitor from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/monitors/E_monitor.comp
Component[4]: emon_pre = E_monitor().
Embedding library   mccode-complex-lib.h
Embedding library   mccode-complex-lib.c
Embedding component Capillary from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/optics/Capillary.comp
Component[5]: tube = Capillary().
Embedding component Arm from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/optics/Arm.comp
Component[6]: tube_out = Arm().
Component[7]: psd0 = PSD_monitor().
Component[8]: psd00 = PSD_monitor().
Component[9]: psd01 = PSD_monitor().
Component[10]: psd02 = PSD_monitor().
Component[11]: psd03 = PSD_monitor().
Component[12]: psd04 = PSD_monitor().
Component[13]: psd1 = PSD_monitor().
Component[14]: psd10 = PSD_monitor().
Component[15]: psd11 = PSD_monitor().
Component[16]: psd12 = PSD_monitor().
Component[17]: psd13 = PSD_monitor().
Component[18]: psd14 = PSD_monitor().
Component[19]: emon = E_monitor().
Component[20]: emon_zm = E_monitor().
Combine metadata blocks into table
Processed 0 metadata blocks
Creating instrument 'Test_capillary' (with 20 component instances)
Starting to create C code ./Test_capillary.c
Embedding file      mccode-r.h (user path)
Embedding file      mcxtrace-r.h (user path)
Compile            './Test_capillary.c -DUSE_NEXUS -lNeXus' to enable NeXus support
Embedding file      mccode-r.c (user path)
Embedding file      mcxtrace-r.c (user path)
Writing instrument 'Test_capillary' and components DECLARE
Writing instrument 'Test_capillary' and components INITIALISE
Writing components TRACE
Writing instrument 'Test_capillary' and components SAVE
Writing instrument 'Test_capillary' and components FINALLY
Writing instrument 'Test_capillary' and components DISPLAY
Embedding file      metadata-r.c (user path)
Embedding file      mccode_main.c (user path)
Warning: The build of the instrument 'Test_capillary' has 90 warnings/errors.
Generated          C code ./Test_capillary.c from Test_capillary.instr
CFLAGS=

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Generating single GPU kernel or single CPU section layout: 

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Generating GPU/CPU -DFUNNEL layout:

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DEBUG: CMD: /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/bin/mcxtrace  finished
INFO: Recompiling: ./Test_capillary.out
DEBUG: CMD: mpicc -o ./Test_capillary.out ./Test_capillary.c -lm -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -Wl,-rpath-link,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -L/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -I/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -Wl,-rpath,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -L/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -DUSE_MPI -lmpi -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -O2 -g -DNDEBUG -I/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -Wl,-rpath,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -L/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -fno-PIC -fPIE -flto -O3 -march=native -fno-math-errno -ftree-vectorize -g -DNDEBUG -D_POSIX_SOURCE -std=c99 -lm
lto-wrapper: warning: using serial compilation of 2 LTRANS jobs
lto-wrapper: note: see the '-flto' option documentation for more information
DEBUG: CMD: mpicc finished
INFO: ===