INFO: No output directory specified (--dir) INFO: Using directory: "SOLEIL_SIXS_20261027_033913" INFO: Regenerating c-file: SOLEIL_SIXS.c DEBUG: CMD: /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/bin/mcxtrace -t -o ./SOLEIL_SIXS.c SOLEIL_SIXS.instr --verbose mcxtrace version 3.99.99 Analyzing file SOLEIL_SIXS.instr Embedding component Progress_bar from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/misc/Progress_bar.comp Component[1]: SIXS_origin = Progress_bar(). Embedding component Undulator from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/sources/Undulator.comp Component[2]: SIXS_Source_U20 = Undulator(). Embedding library monitor_nd-lib.h Embedding library monitor_nd-lib.c Embedding library read_table-lib.h Embedding library read_table-lib.c Embedding library interoff-lib.h Embedding library interoff-lib.c Embedding component Monitor_nD from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/monitors/Monitor_nD.comp Component[3]: SIXS_mon_src_xy = Monitor_nD(). Component[4]: SIXS_mon_src_e = Monitor_nD(). Embedding component Slit from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/optics/Slit.comp Component[5]: SIXS_slit = Slit(). Component[6]: SIXS_slit_mon_xy = Monitor_nD(). Embedding component Arm from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/optics/Arm.comp Component[7]: SIXS_DCM_location = Arm(). Embedding library perfect_crystals-lib.h Embedding library mccode-complex-lib.h Embedding library mccode-complex-lib.c Embedding library perfect_crystals-lib.c Embedding component Bragg_crystal from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/optics/Bragg_crystal.comp Component[8]: SIXS_dcm_xtal0 = Bragg_crystal(). Component[9]: SIXS_dcm0 = Arm(). Component[10]: SIXS_dcm_xtal1 = Bragg_crystal(). Component[11]: SIXS_dcm1 = Arm(). Component[12]: SIXS_mon_dcm_e = Monitor_nD(). Component[13]: SIXS_mon_dcm_xy = Monitor_nD(). Component[14]: SIXS_M1_location = Arm(). Component[15]: SIXS_M1_rotated = Arm(). Embedding library reflectivity-lib.h Embedding library reflectivity-lib.c Embedding component Mirror_curved from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/optics/Mirror_curved.comp Component[16]: SIXS_M1 = Mirror_curved(). Component[17]: SIXS_M1_out = Arm(). Component[18]: SIXS_M2_location = Arm(). Component[19]: SIXS_M2_rotated = Arm(). Component[20]: SIXS_M2 = Mirror_curved(). Component[21]: SIXS_M2_out = Arm(). Component[22]: SIXS_sample_stage = Monitor_nD(). Embedding component Single_crystal from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/samples/Single_crystal.comp Component[23]: SIXS_sx_layer = Single_crystal(). Component[24]: SIXS_sx_bulk = Single_crystal(). Component[25]: SIXS_sample_out = Arm(). Component[26]: SIXS_det4pi = Monitor_nD(). Component[27]: SIXS_detector_layer = Monitor_nD(). Component[28]: SIXS_detector_bulk = Monitor_nD(). Combine metadata blocks into table Processed 0 metadata blocks Creating instrument 'SOLEIL_SIXS' (with 28 component instances) Starting to create C code ./SOLEIL_SIXS.c Embedding file mccode-r.h (user path) Embedding file mcxtrace-r.h (user path) Compile './SOLEIL_SIXS.c -DUSE_NEXUS -lNeXus' to enable NeXus support Embedding file mccode-r.c (user path) Embedding file mcxtrace-r.c (user path) Writing instrument 'SOLEIL_SIXS' and components DECLARE Writing instrument 'SOLEIL_SIXS' and components INITIALISE Writing components TRACE Writing instrument 'SOLEIL_SIXS' and components SAVE Writing instrument 'SOLEIL_SIXS' and components FINALLY Writing instrument 'SOLEIL_SIXS' and components DISPLAY Embedding file metadata-r.c (user path) Embedding file mccode_main.c (user path) Warning: The build of the instrument 'SOLEIL_SIXS' has 97 warnings/errors. Generated C code ./SOLEIL_SIXS.c from SOLEIL_SIXS.instr CFLAGS= @GSLFLAGS@ -DFUNNEL -std=c99 ----------------------------------------------------------- Generating single GPU kernel or single CPU section layout: -> SPLIT N at component SIXS_sample_stage ----------------------------------------------------------- Generating GPU/CPU -DFUNNEL layout: Component SIXS_Source_U20 is NOACC, CPUONLY=1 -> FUNNEL mode enabled, SPLIT within buffer. -> CPU section from component SIXS_Source_U20 -> GPU kernel from component SIXS_mon_src_xy -> SPLIT within buffer at component SIXS_sample_stage ----------------------------------------------------------- DEBUG: CMD: /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/bin/mcxtrace finished INFO: Recompiling: ./SOLEIL_SIXS.out DEBUG: CMD: mpicc -o ./SOLEIL_SIXS.out ./SOLEIL_SIXS.c -lm -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -Wl,-rpath-link,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -L/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -I/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -Wl,-rpath,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -L/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -DUSE_MPI -lmpi -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -O2 -g -DNDEBUG -I/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -Wl,-rpath,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -L/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -fno-PIC -fPIE -flto -O3 -march=native -fno-math-errno -ftree-vectorize -g -DNDEBUG -D_POSIX_SOURCE -std=c99 -lm -I/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -Wl,-rpath,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -L/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -lgsl -lgslcblas -DFUNNEL -std=c99 ./SOLEIL_SIXS.c: In function 'reflec_Init': ./SOLEIL_SIXS.c:14722:17: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 14722 | int N=(unsigned int)((double **) pars)[0]; | ^ lto-wrapper: warning: using serial compilation of 4 LTRANS jobs lto-wrapper: note: see the '-flto' option documentation for more information /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/bin/../libexec/gcc/x86_64-conda-linux-gnu/14.3.0/ld: /tmp/ccLOuzeS.ltrans0.ltrans.o: in function `read_hkl_data': /u/data/pkwi/xTESTS/2026-10-27/mcxtrace-3.99.99_mpi_x_20_1e7_Linux_20261027_0330_30/SOLEIL_SIXS/./SOLEIL_SIXS.c:15450:(.text.read_hkl_data+0x1a5): warning: the use of `tmpnam' is dangerous, better use `mkstemp' DEBUG: CMD: mpicc finished INFO: ===