INFO: No output directory specified (--dir) INFO: Using directory: "SOLEIL_PUMA_20261027_033816" INFO: Regenerating c-file: SOLEIL_PUMA.c DEBUG: CMD: /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/bin/mcxtrace -t -o ./SOLEIL_PUMA.c SOLEIL_PUMA.instr --verbose mcxtrace version 3.99.99 Analyzing file SOLEIL_PUMA.instr Embedding component Progress_bar from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/misc/Progress_bar.comp Component[1]: PUMA_origin = Progress_bar(). Embedding component Wiggler from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/sources/Wiggler.comp Component[2]: PUMA_Source = Wiggler(). Embedding component Slit from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/optics/Slit.comp Component[3]: PUMA_slit1 = Slit(). Component[4]: PUMA_slit2 = Slit(). Embedding component E_monitor from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/monitors/E_monitor.comp Component[5]: PUMA_mon_src_e = E_monitor(). Embedding component PSD_monitor from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/monitors/PSD_monitor.comp Component[6]: PUMA_mon_src_xy = PSD_monitor(). Embedding component Arm from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/optics/Arm.comp Component[7]: PUMA_HFM_location = Arm(). Component[8]: PUMA_HFM_rotated = Arm(). Embedding library mccode-complex-lib.h Embedding library mccode-complex-lib.c Embedding library read_table-lib.h Embedding library read_table-lib.c Embedding library reflectivity-lib.h Embedding library reflectivity-lib.c Embedding component Mirror_curved from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/optics/Mirror_curved.comp Component[9]: PUMA_mirror_HFM = Mirror_curved(). Component[10]: PUMA_HFM_out = Arm(). Component[11]: PUMA_mon_HFM_out_xy = PSD_monitor(). Component[12]: PUMA_DCM_location = Arm(). Embedding library perfect_crystals-lib.h Embedding library perfect_crystals-lib.c Embedding component Bragg_crystal from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/optics/Bragg_crystal.comp Component[13]: PUMA_DCM_xtal1 = Bragg_crystal(). Component[14]: PUMA_DCM_xtal1_out = Arm(). Component[15]: PUMA_mon_DCM_xtal1_only_xy = PSD_monitor(). Component[16]: PUMA_DCM_xtal2 = Bragg_crystal(). Component[17]: PUMA_DCM_xtal2_out = Arm(). Component[18]: PUMA_mon_DCM_out_e = E_monitor(). Component[19]: PUMA_mon_DCM_out_xy = PSD_monitor(). Component[20]: PUMA_slit3 = Slit(). Component[21]: PUMA_slit4 = Slit(). Component[22]: PUMA_slit5 = Slit(). Component[23]: PUMA_KB_VFM_location = Arm(). Component[24]: PUMA_mon_KB_in_xy = PSD_monitor(). Component[25]: PUMA_KB_VFM_rotated = Arm(). Component[26]: PUMA_mirror_KB_VFM = Mirror_curved(). Component[27]: PUMA_KB_VFM_out = Arm(). Component[28]: PUMA_mon_KB_VFM_out_xy = PSD_monitor(). Component[29]: PUMA_KB_HFM_location = Arm(). Component[30]: PUMA_KB_HFM_rotated = Arm(). Component[31]: PUMA_mirror_KB_HFM = Mirror_curved(). Component[32]: PUMA_KB_HFM_out = Arm(). Component[33]: PUMA_mon_KB_HFM_out_xy = PSD_monitor(). Component[34]: PUMA_sample_location = Arm(). Component[35]: PUMA_mon_sample_xy = PSD_monitor(). Component[36]: PUMA_mon_sample_e = E_monitor(). Combine metadata blocks into table Processed 0 metadata blocks Creating instrument 'SOLEIL_PUMA' (with 36 component instances) Starting to create C code ./SOLEIL_PUMA.c Embedding file mccode-r.h (user path) Embedding file mcxtrace-r.h (user path) Compile './SOLEIL_PUMA.c -DUSE_NEXUS -lNeXus' to enable NeXus support Embedding file mccode-r.c (user path) Embedding file mcxtrace-r.c (user path) Writing instrument 'SOLEIL_PUMA' and components DECLARE Writing instrument 'SOLEIL_PUMA' and components INITIALISE Writing components TRACE Writing instrument 'SOLEIL_PUMA' and components SAVE Writing instrument 'SOLEIL_PUMA' and components FINALLY Writing instrument 'SOLEIL_PUMA' and components DISPLAY Embedding file metadata-r.c (user path) Embedding file mccode_main.c (user path) Warning: The build of the instrument 'SOLEIL_PUMA' has 103 warnings/errors. Generated C code ./SOLEIL_PUMA.c from SOLEIL_PUMA.instr CFLAGS= -std=c99 ----------------------------------------------------------- Generating single GPU kernel or single CPU section layout: ----------------------------------------------------------- Generating GPU/CPU -DFUNNEL layout: ----------------------------------------------------------- DEBUG: CMD: /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/bin/mcxtrace finished INFO: Recompiling: ./SOLEIL_PUMA.out DEBUG: CMD: mpicc -o ./SOLEIL_PUMA.out ./SOLEIL_PUMA.c -lm -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -Wl,-rpath-link,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -L/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -I/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -Wl,-rpath,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -L/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -DUSE_MPI -lmpi -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -O2 -g -DNDEBUG -I/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -Wl,-rpath,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -L/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -fno-PIC -fPIE -flto -O3 -march=native -fno-math-errno -ftree-vectorize -g -DNDEBUG -D_POSIX_SOURCE -std=c99 -lm -std=c99 ./SOLEIL_PUMA.c: In function 'reflec_Init': ./SOLEIL_PUMA.c:10171:17: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 10171 | int N=(unsigned int)((double **) pars)[0]; | ^ lto-wrapper: warning: using serial compilation of 2 LTRANS jobs lto-wrapper: note: see the '-flto' option documentation for more information DEBUG: CMD: mpicc finished INFO: ===