INFO: No output directory specified (--dir) INFO: Using directory: "MAXII_811_20261027_033328" INFO: Regenerating c-file: MAXII_811.c DEBUG: CMD: /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/bin/mcxtrace -t -o ./MAXII_811.c MAXII_811.instr --verbose mcxtrace version 3.99.99 Analyzing file MAXII_811.instr Embedding component Progress_bar from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/misc/Progress_bar.comp Component[1]: Origin = Progress_bar(). Embedding library read_table-lib.h Embedding library read_table-lib.c Embedding component Source_gaussian from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/sources/Source_gaussian.comp Component[2]: wiggler = Source_gaussian(). Embedding component PSD_monitor from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/monitors/PSD_monitor.comp Component[3]: source_psd = PSD_monitor(). Embedding component E_monitor from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/monitors/E_monitor.comp Component[4]: source_E = E_monitor(). Embedding component L_monitor from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/monitors/L_monitor.comp Component[5]: source_L = L_monitor(). Embedding component Slit from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/optics/Slit.comp Component[6]: ap1 = Slit(). Component[7]: ap2 = Slit(). Embedding library interoff-lib.h Embedding library interoff-lib.c Embedding component Filter from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/optics/Filter.comp Component[8]: fe_c_filter = Filter(). Component[9]: prim_slitv = Slit(). Component[10]: prim_slith = Slit(). Component[11]: ap3 = Slit(). Component[12]: m_entry_psd = PSD_monitor(). Component[13]: m_entry_E = E_monitor(). Component[14]: m_entry_L = L_monitor(). Embedding component Arm from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/optics/Arm.comp Component[15]: mirror1_pos = Arm(). Component[16]: mirror1_mnt = Arm(). Embedding library mccode-complex-lib.h Embedding library mccode-complex-lib.c Embedding library reflectivity-lib.h Embedding library reflectivity-lib.c Embedding component Mirror_curved from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/optics/Mirror_curved.comp Component[17]: mirror1 = Mirror_curved(). Component[18]: mirror1_exit = Arm(). Component[19]: att_filter1 = Filter(). Component[20]: att_filter2 = Filter(). Component[21]: att_filter3 = Filter(). Component[22]: c_filter = Filter(). Embedding library perfect_crystals-lib.h Embedding library perfect_crystals-lib.c Embedding component Bragg_crystal from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/optics/Bragg_crystal.comp Component[23]: mono_lower = Bragg_crystal(). Component[24]: mono_upper_mnt = Arm(). Component[25]: mono_upper = Bragg_crystal(). Component[26]: mirror2_mnt = Arm(). Component[27]: mirror2 = Mirror_curved(). Component[28]: mirror2_exit = Arm(). Component[29]: be_window = Filter(). Component[30]: hutch_psd = PSD_monitor(). Component[31]: hutch_E = E_monitor(). Component[32]: hutch_E2 = E_monitor(). Component[33]: hucth_L = L_monitor(). Component[34]: xafs_slit = Slit(). Embedding component Monitor from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/monitors/Monitor.comp Component[35]: I0 = Monitor(). Component[36]: xafs_sample_pos = Arm(). Embedding component Absorption_sample from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/samples/Absorption_sample.comp Component[37]: xafs_sample = Absorption_sample(). Component[38]: I1 = Monitor(). Component[39]: xafs_ref_sample_pos = Arm(). Component[40]: xafs_ref_sample = Filter(). Component[41]: I2 = Monitor(). Component[42]: diff_sample_pos = Arm(). Component[43]: diff_sample_psd = PSD_monitor(). Embedding component PowderN from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/samples/PowderN.comp Component[44]: si_sample = PowderN(). Component[45]: tth_arm = Arm(). Embedding component PSD_monitor_4PI from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/monitors/PSD_monitor_4PI.comp Component[46]: sphere_psd = PSD_monitor_4PI(). Component[47]: square_psd = PSD_monitor(). Component[48]: pilatus100k = PSD_monitor(). Combine metadata blocks into table Processed 0 metadata blocks Creating instrument 'MAXII_811' (with 48 component instances) Starting to create C code ./MAXII_811.c Embedding file mccode-r.h (user path) Embedding file mcxtrace-r.h (user path) Compile './MAXII_811.c -DUSE_NEXUS -lNeXus' to enable NeXus support Embedding file mccode-r.c (user path) Embedding file mcxtrace-r.c (user path) Writing instrument 'MAXII_811' and components DECLARE Writing instrument 'MAXII_811' and components INITIALISE Writing components TRACE Writing instrument 'MAXII_811' and components SAVE Writing instrument 'MAXII_811' and components FINALLY Writing instrument 'MAXII_811' and components DISPLAY Embedding file metadata-r.c (user path) Embedding file mccode_main.c (user path) Warning: The build of the instrument 'MAXII_811' has 158 warnings/errors. Generated C code ./MAXII_811.c from MAXII_811.instr CFLAGS= -std=c99 ----------------------------------------------------------- Generating single GPU kernel or single CPU section layout: -> SPLIT N at component si_sample ----------------------------------------------------------- Generating GPU/CPU -DFUNNEL layout: -> SPLIT within buffer at component si_sample ----------------------------------------------------------- DEBUG: CMD: /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/bin/mcxtrace finished INFO: Recompiling: ./MAXII_811.out DEBUG: CMD: mpicc -o ./MAXII_811.out ./MAXII_811.c -lm -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -Wl,-rpath-link,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -L/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -I/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -Wl,-rpath,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -L/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -DUSE_MPI -lmpi -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -O2 -g -DNDEBUG -I/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -Wl,-rpath,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -L/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -fno-PIC -fPIE -flto -O3 -march=native -fno-math-errno -ftree-vectorize -g -DNDEBUG -D_POSIX_SOURCE -std=c99 -lm -std=c99 ./MAXII_811.c: In function 'reflec_Init': ./MAXII_811.c:11928:17: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 11928 | int N=(unsigned int)((double **) pars)[0]; | ^ lto-wrapper: warning: using serial compilation of 4 LTRANS jobs lto-wrapper: note: see the '-flto' option documentation for more information /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/bin/../libexec/gcc/x86_64-conda-linux-gnu/14.3.0/ld: /tmp/ccarj3R8.ltrans1.ltrans.o: in function `read_line_data.constprop.0': /u/data/pkwi/xTESTS/2026-10-27/mcxtrace-3.99.99_mpi_x_20_1e7_Linux_20261027_0330_30/MAXII_811/./MAXII_811.c:13242:(.text.read_line_data.constprop.0+0x152): warning: the use of `tmpnam' is dangerous, better use `mkstemp' DEBUG: CMD: mpicc finished INFO: ===