INFO: No output directory specified (--dir) INFO: Using directory: "CXO_20261027_033210" INFO: Regenerating c-file: CXO.c DEBUG: CMD: /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/bin/mcxtrace -t -o ./CXO.c CXO.instr --verbose mcxtrace version 3.99.99 Analyzing file CXO.instr Embedding component Progress_bar from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/misc/Progress_bar.comp Component[1]: origin = Progress_bar(). Embedding component Arm from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/optics/Arm.comp Component[2]: optics_centre = Arm(). Component[3]: optics_entry = Arm(). Component[4]: off_axis = Arm(). Embedding library read_table-lib.h Embedding library read_table-lib.c Embedding component Source_div from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/sources/Source_div.comp Component[5]: src_div = Source_div(). Embedding component E_monitor from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/monitors/E_monitor.comp Component[6]: preOp_emon = E_monitor(). Embedding component PSD_monitor from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/monitors/PSD_monitor.comp Component[7]: preOp_psd = PSD_monitor(). Embedding library monitor_nd-lib.h Embedding library monitor_nd-lib.c Embedding library interoff-lib.h Embedding library interoff-lib.c Embedding component Monitor_nD from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/monitors/Monitor_nD.comp Component[8]: preOp_div = Monitor_nD(). Embedding component Shell_p from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/astrox/Shell_p.comp Component[9]: sh1_p = Shell_p(). Component[10]: sh3_p = Shell_p(). Component[11]: sh4_p = Shell_p(). Component[12]: sh6_p = Shell_p(). Component[13]: midOp_emon = E_monitor(). Embedding component Shell_h from file /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/share/mcxtrace/resources/astrox/Shell_h.comp Component[14]: sh1_h = Shell_h(). Component[15]: sh3_h = Shell_h(). Component[16]: sh4_h = Shell_h(). Component[17]: sh6_h = Shell_h(). Component[18]: postOp_emon = E_monitor(). Component[19]: postOp_psd = PSD_monitor(). Component[20]: postOp_div = Monitor_nD(). Component[21]: near_psd = PSD_monitor(). Component[22]: fp_emon = E_monitor(). Component[23]: fp_psd = PSD_monitor(). Component[24]: fp_psd_auto = Monitor_nD(). Component[25]: far_psd = PSD_monitor(). Combine metadata blocks into table Processed 0 metadata blocks Creating instrument 'CXO' (with 25 component instances) Starting to create C code ./CXO.c Embedding file mccode-r.h (user path) Embedding file mcxtrace-r.h (user path) Compile './CXO.c -DUSE_NEXUS -lNeXus' to enable NeXus support Embedding file mccode-r.c (user path) Embedding file mcxtrace-r.c (user path) Writing instrument 'CXO' and components DECLARE Writing instrument 'CXO' and components INITIALISE Writing components TRACE Writing instrument 'CXO' and components SAVE Writing instrument 'CXO' and components FINALLY Writing instrument 'CXO' and components DISPLAY Embedding file metadata-r.c (user path) Embedding file mccode_main.c (user path) Warning: The build of the instrument 'CXO' has 91 warnings/errors. Generated C code ./CXO.c from CXO.instr CFLAGS= ----------------------------------------------------------- Generating single GPU kernel or single CPU section layout: ----------------------------------------------------------- Generating GPU/CPU -DFUNNEL layout: ----------------------------------------------------------- DEBUG: CMD: /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/bin/mcxtrace finished INFO: Recompiling: ./CXO.out DEBUG: CMD: mpicc -o ./CXO.out ./CXO.c -lm -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -Wl,-rpath-link,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -L/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -I/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -Wl,-rpath,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -L/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -DUSE_MPI -lmpi -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -O2 -g -DNDEBUG -I/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/include -Wl,-rpath,/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -L/u/data/pkwi/WORK/micromamba/envs/mcxtrace-3.x/lib -fno-PIC -fPIE -flto -O3 -march=native -fno-math-errno -ftree-vectorize -g -DNDEBUG -D_POSIX_SOURCE -std=c99 -lm lto-wrapper: warning: using serial compilation of 3 LTRANS jobs lto-wrapper: note: see the '-flto' option documentation for more information DEBUG: CMD: mpicc finished INFO: ===