INFO: No output directory specified (--dir)
INFO: Using directory: "Test_shells_20241024_052948"
INFO: Regenerating c-file: Test_shells.c
DEBUG: CMD: /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/bin/mcxtrace -t -o ./Test_shells.c Test_shells.instr
CFLAGS=
        
-----------------------------------------------------------

Generating single GPU kernel or single CPU section layout: 

-----------------------------------------------------------

Generating GPU/CPU -DFUNNEL layout:

-----------------------------------------------------------
DEBUG: CMD: /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/bin/mcxtrace finished
INFO: Recompiling: ./Test_shells.out
DEBUG: CMD: nvc -o ./Test_shells.out ./Test_shells.c -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -Wl,-rpath-link,/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -L/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -mtune=haswell -fPIC -O2 -isystem /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/include -fast -Minfo=accel -acc=gpu -gpu=managed -DOPENACC
"./Test_shells.c", line 4483: warning: variable "num" was declared but never referenced [declared_but_not_referenced]
          int num = 3;
              ^

Remark: individual warnings can be suppressed with "--diag_suppress <warning-name>"

"./Test_shells.c", line 6606: warning: variable "ret" was declared but never referenced [declared_but_not_referenced]
    int ret=1,stat=0,plane_stat=0;
        ^

"./Test_shells.c", line 6779: warning: variable "D" was declared but never referenced [declared_but_not_referenced]
    double A,B,C,D,k;
                 ^

"./Test_shells.c", line 8563: warning: variable "C0" was set but never used [set_but_not_used]
          double alpha,thetap,thetah,P,d,e,C0;
                                           ^

"./Test_shells.c", line 9018: warning: integer conversion resulted in a change of sign [integer_sign_change]
      Vars->OFF_polyidx       = -1;
                                ^

"./Test_shells.c", line 10020: warning: variable "ratio" was set but never used [set_but_not_used]
      double  ratio;
              ^

"./Test_shells.c", line 10535: warning: variable "y0" is used before its value is set [used_before_set]
              if (y0 < ymin) y0=ymin; 
                  ^

"./Test_shells.c", line 10537: warning: variable "y1" is used before its value is set [used_before_set]
              if (y1 < ymin) y1=ymin; 
                  ^

"./Test_shells.c", line 10909: warning: variable "minx" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
          ^

"./Test_shells.c", line 10909: warning: variable "maxx" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                       ^

"./Test_shells.c", line 10909: warning: variable "miny" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                     ^

"./Test_shells.c", line 10909: warning: variable "maxy" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                                  ^

"./Test_shells.c", line 10909: warning: variable "minz" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                                                ^

"./Test_shells.c", line 10909: warning: variable "maxz" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                                                             ^

"./Test_shells.c", line 11266: warning: variable "plane_Eq" was declared but never referenced [declared_but_not_referenced]
    double plane_Eq [4];
           ^

"./Test_shells.c", line 12574: warning: variable "tc2" was set but never used [set_but_not_used]
      Coords tc1, tc2;
                  ^

"./Test_shells.c", line 12562: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 1;
        ^

"./Test_shells.c", line 12615: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 2;
        ^

"./Test_shells.c", line 12689: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 3;
        ^

"./Test_shells.c", line 12752: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 4;
        ^

"./Test_shells.c", line 12801: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 5;
        ^

"./Test_shells.c", line 12875: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 6;
        ^

"./Test_shells.c", line 12949: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 7;
        ^

"./Test_shells.c", line 13019: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 8;
        ^

"./Test_shells.c", line 13068: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 9;
        ^

"./Test_shells.c", line 13131: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 10;
        ^

"./Test_shells.c", line 13320: warning: variable "status" was set but never used [set_but_not_used]
      int status=0;
          ^

"./Test_shells.c", line 13433: warning: variable "i" was declared but never referenced [declared_but_not_referenced]
      int i,j;
          ^

"./Test_shells.c", line 13433: warning: variable "j" was declared but never referenced [declared_but_not_referenced]
      int i,j;
            ^

"./Test_shells.c", line 13434: warning: variable "p1" was declared but never referenced [declared_but_not_referenced]
      double *p1,*p2,*p3;
              ^

"./Test_shells.c", line 13434: warning: variable "p2" was declared but never referenced [declared_but_not_referenced]
      double *p1,*p2,*p3;
                  ^

"./Test_shells.c", line 13434: warning: variable "p3" was declared but never referenced [declared_but_not_referenced]
      double *p1,*p2,*p3;
                      ^

"./Test_shells.c", line 13816: warning: variable "C0" was set but never used [set_but_not_used]
      double alpha,thetap,thetah,P,d,e,C0;
                                       ^

"./Test_shells.c", line 14441: warning: variable "kk" was declared but never referenced [declared_but_not_referenced]
    double kk,theta_x,theta_y,l,e,k;
           ^

"./Test_shells.c", line 14618: warning: variable "k" was declared but never referenced [declared_but_not_referenced]
      int i,j,k;
              ^

"./Test_shells.c", line 14619: warning: variable "e" was declared but never referenced [declared_but_not_referenced]
      double e,p2;
             ^

"./Test_shells.c", line 14786: warning: variable "wx" was declared but never referenced [declared_but_not_referenced]
              double wx,wy,wz;
                     ^

"./Test_shells.c", line 14786: warning: variable "wy" was declared but never referenced [declared_but_not_referenced]
              double wx,wy,wz;
                        ^

"./Test_shells.c", line 14786: warning: variable "wz" was declared but never referenced [declared_but_not_referenced]
              double wx,wy,wz;
                           ^

"./Test_shells.c", line 14776: warning: variable "i_small" was set but never used [set_but_not_used]
          int i_small;
              ^

"./Test_shells.c", line 14780: warning: variable "nx" was declared but never referenced [declared_but_not_referenced]
          double nx,ny,nz;
                 ^

"./Test_shells.c", line 14780: warning: variable "ny" was declared but never referenced [declared_but_not_referenced]
          double nx,ny,nz;
                    ^

"./Test_shells.c", line 14780: warning: variable "nz" was declared but never referenced [declared_but_not_referenced]
          double nx,ny,nz;
                       ^

"./Test_shells.c", line 15057: warning: variable "wx" was declared but never referenced [declared_but_not_referenced]
              double wx,wy,wz;
                     ^

"./Test_shells.c", line 15057: warning: variable "wy" was declared but never referenced [declared_but_not_referenced]
              double wx,wy,wz;
                        ^

"./Test_shells.c", line 15057: warning: variable "wz" was declared but never referenced [declared_but_not_referenced]
              double wx,wy,wz;
                           ^

"./Test_shells.c", line 15047: warning: variable "i_small" was set but never used [set_but_not_used]
          int i_small;
              ^

"./Test_shells.c", line 15051: warning: variable "nx" was declared but never referenced [declared_but_not_referenced]
          double nx,ny,nz;
                 ^

"./Test_shells.c", line 15051: warning: variable "ny" was declared but never referenced [declared_but_not_referenced]
          double nx,ny,nz;
                    ^

"./Test_shells.c", line 15051: warning: variable "nz" was declared but never referenced [declared_but_not_referenced]
          double nx,ny,nz;
                       ^

"./Test_shells.c", line 15335: warning: variable "wx" was declared but never referenced [declared_but_not_referenced]
              double wx,wy,wz;
                     ^

"./Test_shells.c", line 15335: warning: variable "wy" was declared but never referenced [declared_but_not_referenced]
              double wx,wy,wz;
                        ^

"./Test_shells.c", line 15335: warning: variable "wz" was declared but never referenced [declared_but_not_referenced]
              double wx,wy,wz;
                           ^

"./Test_shells.c", line 15325: warning: variable "i_small" was set but never used [set_but_not_used]
          int i_small;
              ^

"./Test_shells.c", line 15329: warning: variable "nx" was declared but never referenced [declared_but_not_referenced]
          double nx,ny,nz;
                 ^

"./Test_shells.c", line 15329: warning: variable "ny" was declared but never referenced [declared_but_not_referenced]
          double nx,ny,nz;
                    ^

"./Test_shells.c", line 15329: warning: variable "nz" was declared but never referenced [declared_but_not_referenced]
          double nx,ny,nz;
                       ^

"./Test_shells.c", line 17042: warning: variable "k" was declared but never referenced [declared_but_not_referenced]
      int k;
          ^

"./Test_shells.c", line 17416: warning: variable "t" was declared but never referenced [declared_but_not_referenced]
    time_t  t;
            ^

"./Test_shells.c", line 17417: warning: variable "ct" was set but never used [set_but_not_used]
    clock_t ct;
            ^

"./Test_shells.c", line 1492: warning: variable "mcstartdate" was set but never used [set_but_not_used]
  static   long mcstartdate            = 0; /* start simulation time */
                ^

"./Test_shells.c", line 2895: warning: function "strcpy_valid" was declared but never referenced [declared_but_not_referenced]
  static char *strcpy_valid(char *valid, char *original)
               ^

mcgenstate:
     86, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getvar:
    100, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getvar_void:
    134, Generating acc routine seq
         Generating NVIDIA GPU code
particle_setvar_void:
    160, Generating acc routine seq
         Generating NVIDIA GPU code
particle_setvar_void_array:
    184, Generating acc routine seq
         Generating NVIDIA GPU code
particle_restore:
    195, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getuservar_byid:
    204, Generating acc routine seq
         Generating NVIDIA GPU code
particle_uservar_init:
    215, Generating acc routine seq
         Generating NVIDIA GPU code
noprintf:
   1539, Generating acc routine seq
         Generating NVIDIA GPU code
str_comp:
   1543, Generating acc routine seq
         Generating NVIDIA GPU code
str_len:
   1552, Generating acc routine seq
         Generating NVIDIA GPU code
mcget_ncount:
   4104, Generating acc routine seq
         Generating NVIDIA GPU code
coords_set:
   4535, Generating acc routine seq
         Generating NVIDIA GPU code
coords_get:
   4546, Generating acc routine seq
         Generating NVIDIA GPU code
coords_add:
   4555, Generating acc routine seq
         Generating NVIDIA GPU code
coords_sub:
   4567, Generating acc routine seq
         Generating NVIDIA GPU code
coords_neg:
   4579, Generating acc routine seq
         Generating NVIDIA GPU code
coords_scale:
   4589, Generating acc routine seq
         Generating NVIDIA GPU code
coords_sp:
   4599, Generating acc routine seq
         Generating NVIDIA GPU code
coords_xp:
   4607, Generating acc routine seq
         Generating NVIDIA GPU code
coords_len:
   4617, Generating acc routine seq
         Generating NVIDIA GPU code
coords_print:
   4639, Generating acc routine seq
         Generating NVIDIA GPU code
coords_norm:
   4646, Generating acc routine seq
         Generating NVIDIA GPU code
rot_set_rotation:
   4692, Generating acc routine seq
         Generating NVIDIA GPU code
rot_test_identity:
   4727, Generating acc routine seq
         Generating NVIDIA GPU code
rot_mul:
   4738, Generating acc routine seq
         Generating NVIDIA GPU code
rot_copy:
   4755, Generating acc routine seq
         Generating NVIDIA GPU code
rot_transpose:
   4766, Generating acc routine seq
         Generating NVIDIA GPU code
rot_apply:
   4782, Generating acc routine seq
         Generating NVIDIA GPU code
vec_prod_func:
   4811, Generating acc routine seq
         Generating NVIDIA GPU code
scalar_prod:
   4822, Generating acc routine seq
         Generating NVIDIA GPU code
norm_func:
   4826, Generating acc routine seq
         Generating NVIDIA GPU code
mccoordschange:
   5003, Generating acc routine seq
         Generating NVIDIA GPU code
mccoordschange_polarisation:
   5034, Generating acc routine seq
         Generating NVIDIA GPU code
normal_vec:
   5051, Generating acc routine seq
         Generating NVIDIA GPU code
solve_2nd_order:
   5150, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_circle:
   5234, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_rect_angular:
   5300, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_rect_real:
   5377, Generating acc routine seq
         Generating NVIDIA GPU code
kiss_srandom:
   5649, Generating acc routine seq
         Generating NVIDIA GPU code
kiss_random:
   5659, Generating acc routine seq
         Generating NVIDIA GPU code
_hash:
   5685, Generating acc routine seq
         Generating NVIDIA GPU code
_randnorm2:
   5726, Generating acc routine seq
         Generating NVIDIA GPU code
_randtriangle:
   5737, Generating acc routine seq
         Generating NVIDIA GPU code
_rand01:
   5742, Generating acc routine seq
         Generating NVIDIA GPU code
_randpm1:
   5750, Generating acc routine seq
         Generating NVIDIA GPU code
_rand0max:
   5758, Generating acc routine seq
         Generating NVIDIA GPU code
_randminmax:
   5765, Generating acc routine seq
         Generating NVIDIA GPU code
mcsetstate:
   6407, Generating acc routine seq
         Generating NVIDIA GPU code
mcgetstate:
   6440, Generating acc routine seq
         Generating NVIDIA GPU code
inside_rectangle:
   6501, Generating acc routine seq
         Generating NVIDIA GPU code
box_intersect:
   6517, Generating acc routine seq
         Generating NVIDIA GPU code
cylinder_intersect:
   6603, Generating acc routine seq
         Generating NVIDIA GPU code
sphere_intersect:
   6671, Generating acc routine seq
         Generating NVIDIA GPU code
plane_intersect:
   6757, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
Table_Index:
   7820, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Value:
   7888, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Value2d:
   7967, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp1d:
   8435, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp1d_nearest:
   8451, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp2d:
   8469, Generating acc routine seq
         Generating NVIDIA GPU code
intersect_paraboloid:
   8487, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
intersect_hyperboloid:
   8562, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
intersect_cone:
   8643, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
Monitor_nD_Trace:
   9613, Generating acc routine seq
         Generating NVIDIA GPU code
off_F:
  10866, Generating acc routine seq
         Generating NVIDIA GPU code
off_sign:
  10871, Generating acc routine seq
         Generating NVIDIA GPU code
off_normal:
  10881, Generating acc routine seq
         Generating NVIDIA GPU code
off_pnpoly:
  10907, Generating acc routine seq
         Generating NVIDIA GPU code
off_intersectPoly:
  10970, Generating acc routine seq
         Generating NVIDIA GPU code
off_init_planes:
  11101, Generating acc routine seq
         Generating NVIDIA GPU code
off_clip_3D_mod:
  11146, Generating acc routine seq
         Generating NVIDIA GPU code
off_clip_3D_mod_grav:
  11263, Generating acc routine seq
         Generating NVIDIA GPU code
off_compare:
  11381, Generating acc routine seq
         Generating NVIDIA GPU code
off_cleanDouble:
  11393, Generating acc routine seq
         Generating NVIDIA GPU code
off_cleanInOut:
  11428, Generating acc routine seq
         Generating NVIDIA GPU code
Min_int:
  11679, Generating acc routine seq
         Generating NVIDIA GPU code
merge:
  11686, Generating acc routine seq
         Generating NVIDIA GPU code
p_to_quadratic:
  11790, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
quadraticSolve:
  11805, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
off_intersect_all:
  11859, Generating acc routine seq
         Generating NVIDIA GPU code
off_intersect:
  11976, Generating acc routine seq
         Generating NVIDIA GPU code
off_x_intersect:
  11998, Generating acc routine seq
         Generating NVIDIA GPU code
init:
  14261, Generating update device(_FLmond_var,_src_var,_shell_c_1_var,_detector_post_optics_var,_instrument_var,_Shell_h_1_var,_Origin_var,_optics_centre_var,_detector_pre_optics_var,_Shell_p_1_var,_filter_var)
class_Progress_bar_trace:
  14304, Generating acc routine seq
         Generating NVIDIA GPU code
class_Source_div_trace:
  14402, Generating acc routine seq
         Generating NVIDIA GPU code
class_PSD_monitor_trace:
  14598, Generating acc routine seq
         Generating NVIDIA GPU code
class_Arm_trace:
  14689, Generating acc routine seq
         Generating NVIDIA GPU code
class_Shell_p_trace:
  14723, Generating acc routine seq
         Generating NVIDIA GPU code
  14886, Reference argument passing prevents parallelization: beta
class_Shell_h_trace:
  15000, Generating acc routine seq
         Generating NVIDIA GPU code
  15157, Reference argument passing prevents parallelization: beta
class_Shell_c_trace:
  15271, Generating acc routine seq
         Generating NVIDIA GPU code
class_Monitor_nD_trace:
  15484, Generating acc routine seq
         Generating NVIDIA GPU code
raytrace:
  15708, Generating acc routine seq
         Generating NVIDIA GPU code
raytrace_all:
  15961, Generating implicit firstprivate(gpu_innerloop)
         Generating NVIDIA GPU code
      15972, #pragma acc loop gang(numgangs), vector(vecsize) /* blockIdx.x threadIdx.x */
  15961, Local memory used for .inl_particle_17997,particleN,.inl_.inl_mcphoton_0_18013,.inl_.X2173_18015,.inl_.inl_.X2379_13_18014
  15972, Generating implicit firstprivate(seed,_particle)
finally:
  16575, Generating update self(_FLmond_var,_shell_c_1_var,_src_var,_detector_post_optics_var,_instrument_var,_Shell_h_1_var,_Origin_var,_optics_centre_var,_detector_pre_optics_var,_Shell_p_1_var,_filter_var)
mcenabletrace:
   5884, Generating update device(mcdotrace)
/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/tools/../miniconda3/bin//ld: warning: /tmp/pgcudafaty4OGiI1o0MGo.o: missing .note.GNU-stack section implies executable stack
/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/tools/../miniconda3/bin//ld: NOTE: This behaviour is deprecated and will be removed in a future version of the linker
DEBUG: CMD: nvc finished
INFO: ===