INFO: No output directory specified (--dir)
INFO: Using directory: "Pump_probe_solvent_20241024_053357"
INFO: Regenerating c-file: Pump_probe_solvent.c
DEBUG: CMD: /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/bin/mcxtrace -t -o ./Pump_probe_solvent.c Pump_probe_solvent.instr
CFLAGS=
            
-----------------------------------------------------------

Generating single GPU kernel or single CPU section layout: 

-----------------------------------------------------------

Generating GPU/CPU -DFUNNEL layout:

-----------------------------------------------------------
DEBUG: CMD: /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/bin/mcxtrace finished
INFO: Recompiling: ./Pump_probe_solvent.out
DEBUG: CMD: nvc -o ./Pump_probe_solvent.out ./Pump_probe_solvent.c -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -Wl,-rpath-link,/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -L/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -mtune=haswell -fPIC -O2 -isystem /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/include -fast -Minfo=accel -acc=gpu -gpu=managed -DOPENACC
"./Pump_probe_solvent.c", line 4489: warning: variable "num" was declared but never referenced [declared_but_not_referenced]
          int num = 3;
              ^

Remark: individual warnings can be suppressed with "--diag_suppress <warning-name>"

"./Pump_probe_solvent.c", line 6612: warning: variable "ret" was declared but never referenced [declared_but_not_referenced]
    int ret=1,stat=0,plane_stat=0;
        ^

"./Pump_probe_solvent.c", line 6785: warning: variable "D" was declared but never referenced [declared_but_not_referenced]
    double A,B,C,D,k;
                 ^

"/usr/include/math.h", line 30: warning: #warning directive: A macro called log was already defined when <math.h> was included. [warning_directive]
  # warning A macro called log was already defined when <math.h> was included.
    ^

"/usr/include/math.h", line 31: warning: #warning directive: This will cause compilation problems. [warning_directive]
  # warning This will cause compilation problems.
    ^

"./Pump_probe_solvent.c", line 8843: warning: variable "i" was declared but never referenced [declared_but_not_referenced]
      int i;
          ^

"./Pump_probe_solvent.c", line 9226: warning: integer conversion resulted in a change of sign [integer_sign_change]
      Vars->OFF_polyidx       = -1;
                                ^

"./Pump_probe_solvent.c", line 10228: warning: variable "ratio" was set but never used [set_but_not_used]
      double  ratio;
              ^

"./Pump_probe_solvent.c", line 10743: warning: variable "y0" is used before its value is set [used_before_set]
              if (y0 < ymin) y0=ymin; 
                  ^

"./Pump_probe_solvent.c", line 10745: warning: variable "y1" is used before its value is set [used_before_set]
              if (y1 < ymin) y1=ymin; 
                  ^

"./Pump_probe_solvent.c", line 11117: warning: variable "minx" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
          ^

"./Pump_probe_solvent.c", line 11117: warning: variable "maxx" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                       ^

"./Pump_probe_solvent.c", line 11117: warning: variable "miny" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                     ^

"./Pump_probe_solvent.c", line 11117: warning: variable "maxy" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                                  ^

"./Pump_probe_solvent.c", line 11117: warning: variable "minz" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                                                ^

"./Pump_probe_solvent.c", line 11117: warning: variable "maxz" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                                                             ^

"./Pump_probe_solvent.c", line 11474: warning: variable "plane_Eq" was declared but never referenced [declared_but_not_referenced]
    double plane_Eq [4];
           ^

"./Pump_probe_solvent.c", line 12814: warning: variable "tc2" was set but never used [set_but_not_used]
      Coords tc1, tc2;
                  ^

"./Pump_probe_solvent.c", line 12802: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 1;
        ^

"./Pump_probe_solvent.c", line 12855: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 2;
        ^

"./Pump_probe_solvent.c", line 12926: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 3;
        ^

"./Pump_probe_solvent.c", line 12987: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 4;
        ^

"./Pump_probe_solvent.c", line 13048: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 5;
        ^

"./Pump_probe_solvent.c", line 13097: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 6;
        ^

"./Pump_probe_solvent.c", line 13155: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 7;
        ^

"./Pump_probe_solvent.c", line 13204: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 8;
        ^

"./Pump_probe_solvent.c", line 13267: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 9;
        ^

"./Pump_probe_solvent.c", line 13351: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 10;
        ^

"./Pump_probe_solvent.c", line 13435: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 11;
        ^

"./Pump_probe_solvent.c", line 13484: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 12;
        ^

"./Pump_probe_solvent.c", line 13543: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 13;
        ^

"./Pump_probe_solvent.c", line 13639: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 14;
        ^

"./Pump_probe_solvent.c", line 13735: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 15;
        ^

"./Pump_probe_solvent.c", line 13798: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 16;
        ^

"./Pump_probe_solvent.c", line 13953: warning: variable "status" was set but never used [set_but_not_used]
      int status=0;
          ^

"./Pump_probe_solvent.c", line 14021: warning: variable "i" was declared but never referenced [declared_but_not_referenced]
      int i;
          ^

"./Pump_probe_solvent.c", line 14074: warning: variable "i" was declared but never referenced [declared_but_not_referenced]
      int i;
          ^

"./Pump_probe_solvent.c", line 14160: warning: variable "i" was declared but never referenced [declared_but_not_referenced]
      int i,j;
          ^

"./Pump_probe_solvent.c", line 14160: warning: variable "j" was declared but never referenced [declared_but_not_referenced]
      int i,j;
            ^

"./Pump_probe_solvent.c", line 14161: warning: variable "p1" was declared but never referenced [declared_but_not_referenced]
      double *p1,*p2,*p3;
              ^

"./Pump_probe_solvent.c", line 14161: warning: variable "p2" was declared but never referenced [declared_but_not_referenced]
      double *p1,*p2,*p3;
                  ^

"./Pump_probe_solvent.c", line 14161: warning: variable "p3" was declared but never referenced [declared_but_not_referenced]
      double *p1,*p2,*p3;
                      ^

"./Pump_probe_solvent.c", line 14241: warning: variable "status" was set but never used [set_but_not_used]
    int status;
        ^

"./Pump_probe_solvent.c", line 14446: warning: variable "i" was declared but never referenced [declared_but_not_referenced]
    int i,j;
        ^

"./Pump_probe_solvent.c", line 14446: warning: variable "j" was declared but never referenced [declared_but_not_referenced]
    int i,j;
          ^

"./Pump_probe_solvent.c", line 15302: warning: variable "k" was declared but never referenced [declared_but_not_referenced]
      int i,j,k;
              ^

"./Pump_probe_solvent.c", line 15303: warning: variable "e" was declared but never referenced [declared_but_not_referenced]
      double e,p2;
             ^

"./Pump_probe_solvent.c", line 15481: warning: variable "rr" was declared but never referenced [declared_but_not_referenced]
        double qq,alpha,ff2,rr;
                            ^

"./Pump_probe_solvent.c", line 15464: warning: variable "pmul" was declared but never referenced [declared_but_not_referenced]
      double pmul=1,p_s;
             ^

"./Pump_probe_solvent.c", line 17982: warning: variable "t" was declared but never referenced [declared_but_not_referenced]
    time_t  t;
            ^

"./Pump_probe_solvent.c", line 17983: warning: variable "ct" was set but never used [set_but_not_used]
    clock_t ct;
            ^

"./Pump_probe_solvent.c", line 1498: warning: variable "mcstartdate" was set but never used [set_but_not_used]
  static   long mcstartdate            = 0; /* start simulation time */
                ^

"./Pump_probe_solvent.c", line 2901: warning: function "strcpy_valid" was declared but never referenced [declared_but_not_referenced]
  static char *strcpy_valid(char *valid, char *original)
               ^

mcgenstate:
     87, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getvar:
    101, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getvar_void:
    136, Generating acc routine seq
         Generating NVIDIA GPU code
particle_setvar_void:
    163, Generating acc routine seq
         Generating NVIDIA GPU code
particle_setvar_void_array:
    188, Generating acc routine seq
         Generating NVIDIA GPU code
particle_restore:
    199, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getuservar_byid:
    208, Generating acc routine seq
         Generating NVIDIA GPU code
particle_uservar_init:
    220, Generating acc routine seq
         Generating NVIDIA GPU code
noprintf:
   1545, Generating acc routine seq
         Generating NVIDIA GPU code
str_comp:
   1549, Generating acc routine seq
         Generating NVIDIA GPU code
str_len:
   1558, Generating acc routine seq
         Generating NVIDIA GPU code
mcget_ncount:
   4110, Generating acc routine seq
         Generating NVIDIA GPU code
coords_set:
   4541, Generating acc routine seq
         Generating NVIDIA GPU code
coords_get:
   4552, Generating acc routine seq
         Generating NVIDIA GPU code
coords_add:
   4561, Generating acc routine seq
         Generating NVIDIA GPU code
coords_sub:
   4573, Generating acc routine seq
         Generating NVIDIA GPU code
coords_neg:
   4585, Generating acc routine seq
         Generating NVIDIA GPU code
coords_scale:
   4595, Generating acc routine seq
         Generating NVIDIA GPU code
coords_sp:
   4605, Generating acc routine seq
         Generating NVIDIA GPU code
coords_xp:
   4613, Generating acc routine seq
         Generating NVIDIA GPU code
coords_len:
   4623, Generating acc routine seq
         Generating NVIDIA GPU code
coords_print:
   4645, Generating acc routine seq
         Generating NVIDIA GPU code
coords_norm:
   4652, Generating acc routine seq
         Generating NVIDIA GPU code
rot_set_rotation:
   4698, Generating acc routine seq
         Generating NVIDIA GPU code
rot_test_identity:
   4733, Generating acc routine seq
         Generating NVIDIA GPU code
rot_mul:
   4744, Generating acc routine seq
         Generating NVIDIA GPU code
rot_copy:
   4761, Generating acc routine seq
         Generating NVIDIA GPU code
rot_transpose:
   4772, Generating acc routine seq
         Generating NVIDIA GPU code
rot_apply:
   4788, Generating acc routine seq
         Generating NVIDIA GPU code
vec_prod_func:
   4817, Generating acc routine seq
         Generating NVIDIA GPU code
scalar_prod:
   4828, Generating acc routine seq
         Generating NVIDIA GPU code
norm_func:
   4832, Generating acc routine seq
         Generating NVIDIA GPU code
mccoordschange:
   5009, Generating acc routine seq
         Generating NVIDIA GPU code
mccoordschange_polarisation:
   5040, Generating acc routine seq
         Generating NVIDIA GPU code
normal_vec:
   5057, Generating acc routine seq
         Generating NVIDIA GPU code
solve_2nd_order:
   5156, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_circle:
   5240, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_rect_angular:
   5306, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_rect_real:
   5383, Generating acc routine seq
         Generating NVIDIA GPU code
kiss_srandom:
   5655, Generating acc routine seq
         Generating NVIDIA GPU code
kiss_random:
   5665, Generating acc routine seq
         Generating NVIDIA GPU code
_hash:
   5691, Generating acc routine seq
         Generating NVIDIA GPU code
_randnorm2:
   5732, Generating acc routine seq
         Generating NVIDIA GPU code
_randtriangle:
   5743, Generating acc routine seq
         Generating NVIDIA GPU code
_rand01:
   5748, Generating acc routine seq
         Generating NVIDIA GPU code
_randpm1:
   5756, Generating acc routine seq
         Generating NVIDIA GPU code
_rand0max:
   5764, Generating acc routine seq
         Generating NVIDIA GPU code
_randminmax:
   5771, Generating acc routine seq
         Generating NVIDIA GPU code
mcsetstate:
   6413, Generating acc routine seq
         Generating NVIDIA GPU code
mcgetstate:
   6446, Generating acc routine seq
         Generating NVIDIA GPU code
inside_rectangle:
   6507, Generating acc routine seq
         Generating NVIDIA GPU code
box_intersect:
   6523, Generating acc routine seq
         Generating NVIDIA GPU code
cylinder_intersect:
   6609, Generating acc routine seq
         Generating NVIDIA GPU code
sphere_intersect:
   6677, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Index:
   7834, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Value:
   7902, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Value2d:
   7981, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp1d:
   8449, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp1d_nearest:
   8465, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp2d:
   8483, Generating acc routine seq
         Generating NVIDIA GPU code
Monitor_nD_Trace:
   9821, Generating acc routine seq
         Generating NVIDIA GPU code
off_F:
  11074, Generating acc routine seq
         Generating NVIDIA GPU code
off_sign:
  11079, Generating acc routine seq
         Generating NVIDIA GPU code
off_normal:
  11089, Generating acc routine seq
         Generating NVIDIA GPU code
off_pnpoly:
  11115, Generating acc routine seq
         Generating NVIDIA GPU code
off_intersectPoly:
  11178, Generating acc routine seq
         Generating NVIDIA GPU code
off_init_planes:
  11309, Generating acc routine seq
         Generating NVIDIA GPU code
off_clip_3D_mod:
  11354, Generating acc routine seq
         Generating NVIDIA GPU code
off_clip_3D_mod_grav:
  11471, Generating acc routine seq
         Generating NVIDIA GPU code
off_compare:
  11589, Generating acc routine seq
         Generating NVIDIA GPU code
off_cleanDouble:
  11601, Generating acc routine seq
         Generating NVIDIA GPU code
off_cleanInOut:
  11636, Generating acc routine seq
         Generating NVIDIA GPU code
Min_int:
  11887, Generating acc routine seq
         Generating NVIDIA GPU code
merge:
  11894, Generating acc routine seq
         Generating NVIDIA GPU code
p_to_quadratic:
  11998, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
quadraticSolve:
  12013, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
off_intersect_all:
  12067, Generating acc routine seq
         Generating NVIDIA GPU code
off_intersect:
  12184, Generating acc routine seq
         Generating NVIDIA GPU code
off_x_intersect:
  12206, Generating acc routine seq
         Generating NVIDIA GPU code
init:
  14758, Generating update device(_src_var,_solvent_var,_det_ccd_var,_instrument_var,_Origin_var,_psd4pi_var,_pulse_shape_chop_var,_sample_var,_sample_pos_var,_sampsd_var,_bananapsd_var,_lmon_src_var,_ap1_var,_beamstop_var,_det_ccd_rad1_var,_det_ccd_rad_var,_emon_src_var)
class_Progress_bar_trace:
  14801, Generating acc routine seq
         Generating NVIDIA GPU code
class_Source_flat_trace:
  14892, Generating acc routine seq
         Generating NVIDIA GPU code
class_E_monitor_trace:
  15029, Generating acc routine seq
         Generating NVIDIA GPU code
class_L_monitor_trace:
  15104, Generating acc routine seq
         Generating NVIDIA GPU code
class_Arm_trace:
  15178, Generating acc routine seq
         Generating NVIDIA GPU code
class_Chopper_simple_trace:
  15215, Generating acc routine seq
         Generating NVIDIA GPU code
class_PSD_monitor_trace:
  15282, Generating acc routine seq
         Generating NVIDIA GPU code
class_Molecule_2state_trace:
  15373, Generating acc routine seq
         Generating NVIDIA GPU code
class_PSD_monitor_4PI_trace:
  15623, Generating acc routine seq
         Generating NVIDIA GPU code
class_Monitor_nD_trace:
  15696, Generating acc routine seq
         Generating NVIDIA GPU code
raytrace:
  15921, Generating acc routine seq
         Generating NVIDIA GPU code
raytrace_all:
  16299, Generating implicit firstprivate(gpu_innerloop)
         Generating NVIDIA GPU code
      16310, #pragma acc loop gang(numgangs), vector(vecsize) /* blockIdx.x threadIdx.x */
  16299, Local memory used for .inl_particle_18251,particleN,.inl_.inl_mcphoton_0_18267,.inl_.X2173_18269,.inl_.inl_.X2376_13_18268
  16310, Generating implicit firstprivate(seed,_particle)
finally:
  17199, Generating update self(_src_var,_solvent_var,_det_ccd_var,_instrument_var,_Origin_var,_psd4pi_var,_pulse_shape_chop_var,_sample_var,_sample_pos_var,_sampsd_var,_bananapsd_var,_lmon_src_var,_ap1_var,_beamstop_var,_det_ccd_rad1_var,_det_ccd_rad_var,_emon_src_var)
mcenabletrace:
   5890, Generating update device(mcdotrace)
/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/tools/../miniconda3/bin//ld: warning: /tmp/pgcudafat2PpIIAgXkpZ7.o: missing .note.GNU-stack section implies executable stack
/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/tools/../miniconda3/bin//ld: NOTE: This behaviour is deprecated and will be removed in a future version of the linker
DEBUG: CMD: nvc finished
INFO: ===