INFO: No output directory specified (--dir)
INFO: Using directory: "NBI_Lab_TOMO_20241024_054625"
INFO: Regenerating c-file: NBI_Lab_TOMO.c
DEBUG: CMD: /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/bin/mcxtrace -t -o ./NBI_Lab_TOMO.c NBI_Lab_TOMO.instr
Info:    'Detector_pn' is a contributed component.
CFLAGS=
        
-----------------------------------------------------------

Generating single GPU kernel or single CPU section layout: 

-----------------------------------------------------------

Generating GPU/CPU -DFUNNEL layout:

-----------------------------------------------------------
DEBUG: CMD: /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/bin/mcxtrace finished
INFO: Recompiling: ./NBI_Lab_TOMO.out
DEBUG: CMD: nvc -o ./NBI_Lab_TOMO.out ./NBI_Lab_TOMO.c -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -Wl,-rpath-link,/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -L/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -mtune=haswell -fPIC -O2 -isystem /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/include -fast -Minfo=accel -acc=gpu -gpu=managed -DOPENACC
"./NBI_Lab_TOMO.c", line 4476: warning: variable "num" was declared but never referenced [declared_but_not_referenced]
          int num = 3;
              ^

Remark: individual warnings can be suppressed with "--diag_suppress <warning-name>"

"./NBI_Lab_TOMO.c", line 6599: warning: variable "ret" was declared but never referenced [declared_but_not_referenced]
    int ret=1,stat=0,plane_stat=0;
        ^

"./NBI_Lab_TOMO.c", line 6772: warning: variable "D" was declared but never referenced [declared_but_not_referenced]
    double A,B,C,D,k;
                 ^

"./NBI_Lab_TOMO.c", line 8768: warning: variable "minx" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
          ^

"./NBI_Lab_TOMO.c", line 8768: warning: variable "maxx" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                       ^

"./NBI_Lab_TOMO.c", line 8768: warning: variable "miny" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                     ^

"./NBI_Lab_TOMO.c", line 8768: warning: variable "maxy" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                                  ^

"./NBI_Lab_TOMO.c", line 8768: warning: variable "minz" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                                                ^

"./NBI_Lab_TOMO.c", line 8768: warning: variable "maxz" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                                                             ^

"./NBI_Lab_TOMO.c", line 9125: warning: variable "plane_Eq" was declared but never referenced [declared_but_not_referenced]
    double plane_Eq [4];
           ^

"./NBI_Lab_TOMO.c", line 10345: warning: variable "tc2" was set but never used [set_but_not_used]
      Coords tc1, tc2;
                  ^

"./NBI_Lab_TOMO.c", line 10333: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 1;
        ^

"./NBI_Lab_TOMO.c", line 10409: warning: variable "tc2" was set but never used [set_but_not_used]
      Coords tc1, tc2;
                  ^

"./NBI_Lab_TOMO.c", line 10386: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 2;
        ^

"./NBI_Lab_TOMO.c", line 10451: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 3;
        ^

"./NBI_Lab_TOMO.c", line 10512: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 4;
        ^

"./NBI_Lab_TOMO.c", line 10574: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 5;
        ^

"./NBI_Lab_TOMO.c", line 10636: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 6;
        ^

"./NBI_Lab_TOMO.c", line 10697: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 7;
        ^

"./NBI_Lab_TOMO.c", line 10746: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 8;
        ^

"./NBI_Lab_TOMO.c", line 10811: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 9;
        ^

"./NBI_Lab_TOMO.c", line 10872: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 10;
        ^

"./NBI_Lab_TOMO.c", line 10934: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 11;
        ^

"./NBI_Lab_TOMO.c", line 10996: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 12;
        ^

"./NBI_Lab_TOMO.c", line 11061: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 13;
        ^

"./NBI_Lab_TOMO.c", line 11188: warning: variable "status" was set but never used [set_but_not_used]
      int status=0;
          ^

"./NBI_Lab_TOMO.c", line 11255: warning: variable "i" was declared but never referenced [declared_but_not_referenced]
      int i;
          ^

"./NBI_Lab_TOMO.c", line 11312: warning: variable "status" was set but never used [set_but_not_used]
    int status=0;
        ^

"./NBI_Lab_TOMO.c", line 11400: warning: variable "status" was set but never used [set_but_not_used]
    int status=0;
        ^

"./NBI_Lab_TOMO.c", line 11940: warning: expression has no effect [expr_has_no_effect]
            1;
            ^

"./NBI_Lab_TOMO.c", line 11976: warning: expression has no effect [expr_has_no_effect]
            1;
            ^

"./NBI_Lab_TOMO.c", line 11902: warning: variable "alpha" was declared but never referenced [declared_but_not_referenced]
    double alpha,e,k,mu,mu0,delta,beta,f;
           ^

"./NBI_Lab_TOMO.c", line 11902: warning: variable "mu" was declared but never referenced [declared_but_not_referenced]
    double alpha,e,k,mu,mu0,delta,beta,f;
                     ^

"./NBI_Lab_TOMO.c", line 11902: warning: variable "beta" was set but never used [set_but_not_used]
    double alpha,e,k,mu,mu0,delta,beta,f;
                                  ^

"./NBI_Lab_TOMO.c", line 11904: warning: variable "i" was declared but never referenced [declared_but_not_referenced]
    int i,status=0;
        ^

"./NBI_Lab_TOMO.c", line 12049: warning: variable "alpha" was declared but never referenced [declared_but_not_referenced]
    double alpha,e,k,mu;
           ^

"./NBI_Lab_TOMO.c", line 13680: warning: variable "t" was declared but never referenced [declared_but_not_referenced]
    time_t  t;
            ^

"./NBI_Lab_TOMO.c", line 13681: warning: variable "ct" was set but never used [set_but_not_used]
    clock_t ct;
            ^

"./NBI_Lab_TOMO.c", line 1485: warning: variable "mcstartdate" was set but never used [set_but_not_used]
  static   long mcstartdate            = 0; /* start simulation time */
                ^

"./NBI_Lab_TOMO.c", line 2888: warning: function "strcpy_valid" was declared but never referenced [declared_but_not_referenced]
  static char *strcpy_valid(char *valid, char *original)
               ^

mcgenstate:
     84, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getvar:
     98, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getvar_void:
    131, Generating acc routine seq
         Generating NVIDIA GPU code
particle_setvar_void:
    156, Generating acc routine seq
         Generating NVIDIA GPU code
particle_setvar_void_array:
    179, Generating acc routine seq
         Generating NVIDIA GPU code
particle_restore:
    190, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getuservar_byid:
    199, Generating acc routine seq
         Generating NVIDIA GPU code
particle_uservar_init:
    209, Generating acc routine seq
         Generating NVIDIA GPU code
noprintf:
   1532, Generating acc routine seq
         Generating NVIDIA GPU code
str_comp:
   1536, Generating acc routine seq
         Generating NVIDIA GPU code
str_len:
   1545, Generating acc routine seq
         Generating NVIDIA GPU code
mcget_ncount:
   4097, Generating acc routine seq
         Generating NVIDIA GPU code
coords_set:
   4528, Generating acc routine seq
         Generating NVIDIA GPU code
coords_get:
   4539, Generating acc routine seq
         Generating NVIDIA GPU code
coords_add:
   4548, Generating acc routine seq
         Generating NVIDIA GPU code
coords_sub:
   4560, Generating acc routine seq
         Generating NVIDIA GPU code
coords_neg:
   4572, Generating acc routine seq
         Generating NVIDIA GPU code
coords_scale:
   4582, Generating acc routine seq
         Generating NVIDIA GPU code
coords_sp:
   4592, Generating acc routine seq
         Generating NVIDIA GPU code
coords_xp:
   4600, Generating acc routine seq
         Generating NVIDIA GPU code
coords_len:
   4610, Generating acc routine seq
         Generating NVIDIA GPU code
coords_print:
   4632, Generating acc routine seq
         Generating NVIDIA GPU code
coords_norm:
   4639, Generating acc routine seq
         Generating NVIDIA GPU code
rot_set_rotation:
   4685, Generating acc routine seq
         Generating NVIDIA GPU code
rot_test_identity:
   4720, Generating acc routine seq
         Generating NVIDIA GPU code
rot_mul:
   4731, Generating acc routine seq
         Generating NVIDIA GPU code
rot_copy:
   4748, Generating acc routine seq
         Generating NVIDIA GPU code
rot_transpose:
   4759, Generating acc routine seq
         Generating NVIDIA GPU code
rot_apply:
   4775, Generating acc routine seq
         Generating NVIDIA GPU code
vec_prod_func:
   4804, Generating acc routine seq
         Generating NVIDIA GPU code
scalar_prod:
   4815, Generating acc routine seq
         Generating NVIDIA GPU code
norm_func:
   4819, Generating acc routine seq
         Generating NVIDIA GPU code
mccoordschange:
   4996, Generating acc routine seq
         Generating NVIDIA GPU code
mccoordschange_polarisation:
   5027, Generating acc routine seq
         Generating NVIDIA GPU code
normal_vec:
   5044, Generating acc routine seq
         Generating NVIDIA GPU code
solve_2nd_order:
   5143, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_circle:
   5227, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_rect_angular:
   5293, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_rect_real:
   5370, Generating acc routine seq
         Generating NVIDIA GPU code
kiss_srandom:
   5642, Generating acc routine seq
         Generating NVIDIA GPU code
kiss_random:
   5652, Generating acc routine seq
         Generating NVIDIA GPU code
_hash:
   5678, Generating acc routine seq
         Generating NVIDIA GPU code
_randnorm2:
   5719, Generating acc routine seq
         Generating NVIDIA GPU code
_randtriangle:
   5730, Generating acc routine seq
         Generating NVIDIA GPU code
_rand01:
   5735, Generating acc routine seq
         Generating NVIDIA GPU code
_randpm1:
   5743, Generating acc routine seq
         Generating NVIDIA GPU code
_rand0max:
   5751, Generating acc routine seq
         Generating NVIDIA GPU code
_randminmax:
   5758, Generating acc routine seq
         Generating NVIDIA GPU code
mcsetstate:
   6400, Generating acc routine seq
         Generating NVIDIA GPU code
mcgetstate:
   6433, Generating acc routine seq
         Generating NVIDIA GPU code
inside_rectangle:
   6494, Generating acc routine seq
         Generating NVIDIA GPU code
box_intersect:
   6510, Generating acc routine seq
         Generating NVIDIA GPU code
cylinder_intersect:
   6596, Generating acc routine seq
         Generating NVIDIA GPU code
sphere_intersect:
   6664, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Index:
   7819, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Value:
   7887, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Value2d:
   7966, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp1d:
   8434, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp1d_nearest:
   8450, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp2d:
   8468, Generating acc routine seq
         Generating NVIDIA GPU code
off_F:
   8725, Generating acc routine seq
         Generating NVIDIA GPU code
off_sign:
   8730, Generating acc routine seq
         Generating NVIDIA GPU code
off_normal:
   8740, Generating acc routine seq
         Generating NVIDIA GPU code
off_pnpoly:
   8766, Generating acc routine seq
         Generating NVIDIA GPU code
off_intersectPoly:
   8829, Generating acc routine seq
         Generating NVIDIA GPU code
off_init_planes:
   8960, Generating acc routine seq
         Generating NVIDIA GPU code
off_clip_3D_mod:
   9005, Generating acc routine seq
         Generating NVIDIA GPU code
off_clip_3D_mod_grav:
   9122, Generating acc routine seq
         Generating NVIDIA GPU code
off_compare:
   9240, Generating acc routine seq
         Generating NVIDIA GPU code
off_cleanDouble:
   9252, Generating acc routine seq
         Generating NVIDIA GPU code
off_cleanInOut:
   9287, Generating acc routine seq
         Generating NVIDIA GPU code
Min_int:
   9538, Generating acc routine seq
         Generating NVIDIA GPU code
merge:
   9545, Generating acc routine seq
         Generating NVIDIA GPU code
p_to_quadratic:
   9649, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
quadraticSolve:
   9664, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
off_intersect_all:
   9718, Generating acc routine seq
         Generating NVIDIA GPU code
off_intersect:
   9835, Generating acc routine seq
         Generating NVIDIA GPU code
off_x_intersect:
   9857, Generating acc routine seq
         Generating NVIDIA GPU code
filter_refract:
   9990, Generating acc routine seq
         Generating NVIDIA GPU code
init:
  11554, Generating update device(_Detector_Si_var,_source_var,_sample_mnt_var,_e_mon2_var,_filter_Al_var,_emonef_var,_emon0_var,_king_var,_instrument_var,_Origin_var,_filter_Be_var,_filterAl_var,_e_mon1_var,_filter_air_var)
class_Progress_bar_trace:
  11597, Generating acc routine seq
         Generating NVIDIA GPU code
class_Source_pt_trace:
  11688, Generating acc routine seq
         Generating NVIDIA GPU code
class_E_monitor_trace:
  11805, Generating acc routine seq
         Generating NVIDIA GPU code
class_Filter_trace:
  11880, Generating acc routine seq
         Generating NVIDIA GPU code
class_Detector_pn_trace:
  12026, Generating acc routine seq
         Generating NVIDIA GPU code
raytrace:
  12122, Generating acc routine seq
         Generating NVIDIA GPU code
raytrace_all:
  12435, Generating implicit firstprivate(gpu_innerloop)
         Generating NVIDIA GPU code
      12446, #pragma acc loop gang(numgangs), vector(vecsize) /* blockIdx.x threadIdx.x */
  12435, Local memory used for .inl_particle_14643,particleN,.inl_.inl_mcphoton_0_14659,.inl_.X1909_14661,.inl_.inl_.X2109_13_14660
  12446, Generating implicit firstprivate(seed,_particle)
finally:
  13103, Generating update self(_Detector_Si_var,_source_var,_sample_mnt_var,_e_mon2_var,_filter_Al_var,_emonef_var,_emon0_var,_king_var,_instrument_var,_Origin_var,_filter_Be_var,_filterAl_var,_e_mon1_var,_filter_air_var)
mcenabletrace:
   5877, Generating update device(mcdotrace)
/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/tools/../miniconda3/bin//ld: warning: /tmp/pgcudafatiD_KyJgGKQtw.o: missing .note.GNU-stack section implies executable stack
/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/tools/../miniconda3/bin//ld: NOTE: This behaviour is deprecated and will be removed in a future version of the linker
DEBUG: CMD: nvc finished
INFO: ===