INFO: No output directory specified (--dir)
INFO: Using directory: "Test_CRL_20241123_063741"
INFO: Regenerating c-file: Test_CRL.c
DEBUG: CMD: /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/bin/mcxtrace -t -o ./Test_CRL.c Test_CRL.instr
CFLAGS=
          
-----------------------------------------------------------

Generating single GPU kernel or single CPU section layout: 

-----------------------------------------------------------

Generating GPU/CPU -DFUNNEL layout:

-----------------------------------------------------------
DEBUG: CMD: /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/bin/mcxtrace finished
INFO: Recompiling: ./Test_CRL.out
DEBUG: CMD: nvc -o ./Test_CRL.out ./Test_CRL.c -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -Wl,-rpath-link,/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -L/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -mtune=haswell -fPIC -O2 -isystem /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/include -fast -Minfo=accel -acc=gpu -gpu=managed -DOPENACC
"./Test_CRL.c", line 4476: warning: variable "num" was declared but never referenced [declared_but_not_referenced]
          int num = 3;
              ^

Remark: individual warnings can be suppressed with "--diag_suppress <warning-name>"

"./Test_CRL.c", line 6599: warning: variable "ret" was declared but never referenced [declared_but_not_referenced]
    int ret=1,stat=0,plane_stat=0;
        ^

"./Test_CRL.c", line 6772: warning: variable "D" was declared but never referenced [declared_but_not_referenced]
    double A,B,C,D,k;
                 ^

"./Test_CRL.c", line 8488: warning: variable "Arg1" was declared but never referenced [declared_but_not_referenced]
        double cos_theta,cos_theta1,Arg,Arg1,s,q;
                                        ^

"./Test_CRL.c", line 8489: warning: variable "k_new1" was declared but never referenced [declared_but_not_referenced]
        double k_new[3],k_new1[3],M,Sign,dd;
                        ^

"./Test_CRL.c", line 8644: warning: variable "alpha" was declared but never referenced [declared_but_not_referenced]
      double Arg,s,q,alpha,beta;
                     ^

"./Test_CRL.c", line 8644: warning: variable "beta" was declared but never referenced [declared_but_not_referenced]
      double Arg,s,q,alpha,beta;
                           ^

"./Test_CRL.c", line 9128: warning: variable "tc2" was set but never used [set_but_not_used]
      Coords tc1, tc2;
                  ^

"./Test_CRL.c", line 9116: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 1;
        ^

"./Test_CRL.c", line 9169: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 2;
        ^

"./Test_CRL.c", line 9240: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 3;
        ^

"./Test_CRL.c", line 9303: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 4;
        ^

"./Test_CRL.c", line 9352: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 5;
        ^

"./Test_CRL.c", line 9415: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 6;
        ^

"./Test_CRL.c", line 9476: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 7;
        ^

"./Test_CRL.c", line 9538: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 8;
        ^

"./Test_CRL.c", line 9600: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 9;
        ^

"./Test_CRL.c", line 9663: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 10;
        ^

"./Test_CRL.c", line 9726: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 11;
        ^

"./Test_CRL.c", line 9881: warning: variable "status" was set but never used [set_but_not_used]
      int status=0;
          ^

"./Test_CRL.c", line 9951: warning: variable "i" was declared but never referenced [declared_but_not_referenced]
      int i,j;
          ^

"./Test_CRL.c", line 9951: warning: variable "j" was declared but never referenced [declared_but_not_referenced]
      int i,j;
            ^

"./Test_CRL.c", line 9952: warning: variable "p1" was declared but never referenced [declared_but_not_referenced]
      double *p1,*p2,*p3;
              ^

"./Test_CRL.c", line 9952: warning: variable "p2" was declared but never referenced [declared_but_not_referenced]
      double *p1,*p2,*p3;
                  ^

"./Test_CRL.c", line 9952: warning: variable "p3" was declared but never referenced [declared_but_not_referenced]
      double *p1,*p2,*p3;
                      ^

"./Test_CRL.c", line 10009: warning: variable "status" was set but never used [set_but_not_used]
    int status=0;
        ^

"./Test_CRL.c", line 10067: warning: variable "status" was set but never used [set_but_not_used]
    int status=0;
        ^

"./Test_CRL.c", line 10108: warning: variable "status" was set but never used [set_but_not_used]
    int status=0;
        ^

"./Test_CRL.c", line 10154: warning: variable "status" was set but never used [set_but_not_used]
    int status;
        ^

"./Test_CRL.c", line 10537: warning: variable "k" was declared but never referenced [declared_but_not_referenced]
      int i,j,k;
              ^

"./Test_CRL.c", line 10538: warning: variable "e" was declared but never referenced [declared_but_not_referenced]
      double e,p2;
             ^

"./Test_CRL.c", line 10626: warning: variable "s2" was declared but never referenced [declared_but_not_referenced]
    double s2x,s2y,s2z,s2;  
                       ^

"./Test_CRL.c", line 10627: warning: variable "alpha" was declared but never referenced [declared_but_not_referenced]
    double F,k,e,theta,alpha,delta;
                       ^

"./Test_CRL.c", line 10731: warning: variable "E" was declared but never referenced [declared_but_not_referenced]
    double E,mu,f,rhoel,dl,d_total,e,k,delta,beta,Refractive_Index_Re,Refractive_Index_Im,w;
           ^

"./Test_CRL.c", line 10731: warning: variable "Refractive_Index_Im" was set but never used [set_but_not_used]
    double E,mu,f,rhoel,dl,d_total,e,k,delta,beta,Refractive_Index_Re,Refractive_Index_Im,w;
                                                                      ^

"./Test_CRL.c", line 10734: warning: variable "i" was declared but never referenced [declared_but_not_referenced]
    int i=0,nr;
        ^

"./Test_CRL.c", line 10852: warning: variable "i" was declared but never referenced [declared_but_not_referenced]
    int i=0,nr;  
        ^

"./Test_CRL.c", line 10854: warning: variable "E" was declared but never referenced [declared_but_not_referenced]
    double E,mu,f,rhoel,dl,d_total,e,k,delta,beta,Refractive_Index_Re,Refractive_Index_Im;
           ^

"./Test_CRL.c", line 10854: warning: variable "Refractive_Index_Im" was set but never used [set_but_not_used]
    double E,mu,f,rhoel,dl,d_total,e,k,delta,beta,Refractive_Index_Re,Refractive_Index_Im;
                                                                      ^

"./Test_CRL.c", line 10983: warning: variable "knx" was declared but never referenced [declared_but_not_referenced]
      double knx,kny,knz;
             ^

"./Test_CRL.c", line 10983: warning: variable "kny" was declared but never referenced [declared_but_not_referenced]
      double knx,kny,knz;
                 ^

"./Test_CRL.c", line 10983: warning: variable "knz" was declared but never referenced [declared_but_not_referenced]
      double knx,kny,knz;
                     ^

"./Test_CRL.c", line 10991: warning: variable "z0" was set but never used [set_but_not_used]
      double x0,z0;
                ^

"./Test_CRL.c", line 12331: warning: variable "z_c" was set but never used [set_but_not_used]
    double z_c,zdepth,w;
           ^

"./Test_CRL.c", line 12337: warning: variable "i" was declared but never referenced [declared_but_not_referenced]
    int i,j=0;
        ^

"./Test_CRL.c", line 12727: warning: variable "t" was declared but never referenced [declared_but_not_referenced]
    time_t  t;
            ^

"./Test_CRL.c", line 12728: warning: variable "ct" was set but never used [set_but_not_used]
    clock_t ct;
            ^

"./Test_CRL.c", line 1485: warning: variable "mcstartdate" was set but never used [set_but_not_used]
  static   long mcstartdate            = 0; /* start simulation time */
                ^

"./Test_CRL.c", line 2888: warning: function "strcpy_valid" was declared but never referenced [declared_but_not_referenced]
  static char *strcpy_valid(char *valid, char *original)
               ^

mcgenstate:
     84, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getvar:
     98, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getvar_void:
    131, Generating acc routine seq
         Generating NVIDIA GPU code
particle_setvar_void:
    156, Generating acc routine seq
         Generating NVIDIA GPU code
particle_setvar_void_array:
    179, Generating acc routine seq
         Generating NVIDIA GPU code
particle_restore:
    190, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getuservar_byid:
    199, Generating acc routine seq
         Generating NVIDIA GPU code
particle_uservar_init:
    209, Generating acc routine seq
         Generating NVIDIA GPU code
noprintf:
   1532, Generating acc routine seq
         Generating NVIDIA GPU code
str_comp:
   1536, Generating acc routine seq
         Generating NVIDIA GPU code
str_len:
   1545, Generating acc routine seq
         Generating NVIDIA GPU code
mcget_ncount:
   4097, Generating acc routine seq
         Generating NVIDIA GPU code
coords_set:
   4528, Generating acc routine seq
         Generating NVIDIA GPU code
coords_get:
   4539, Generating acc routine seq
         Generating NVIDIA GPU code
coords_add:
   4548, Generating acc routine seq
         Generating NVIDIA GPU code
coords_sub:
   4560, Generating acc routine seq
         Generating NVIDIA GPU code
coords_neg:
   4572, Generating acc routine seq
         Generating NVIDIA GPU code
coords_scale:
   4582, Generating acc routine seq
         Generating NVIDIA GPU code
coords_sp:
   4592, Generating acc routine seq
         Generating NVIDIA GPU code
coords_xp:
   4600, Generating acc routine seq
         Generating NVIDIA GPU code
coords_len:
   4610, Generating acc routine seq
         Generating NVIDIA GPU code
coords_print:
   4632, Generating acc routine seq
         Generating NVIDIA GPU code
coords_norm:
   4639, Generating acc routine seq
         Generating NVIDIA GPU code
rot_set_rotation:
   4685, Generating acc routine seq
         Generating NVIDIA GPU code
rot_test_identity:
   4720, Generating acc routine seq
         Generating NVIDIA GPU code
rot_mul:
   4731, Generating acc routine seq
         Generating NVIDIA GPU code
rot_copy:
   4748, Generating acc routine seq
         Generating NVIDIA GPU code
rot_transpose:
   4759, Generating acc routine seq
         Generating NVIDIA GPU code
rot_apply:
   4775, Generating acc routine seq
         Generating NVIDIA GPU code
vec_prod_func:
   4804, Generating acc routine seq
         Generating NVIDIA GPU code
scalar_prod:
   4815, Generating acc routine seq
         Generating NVIDIA GPU code
norm_func:
   4819, Generating acc routine seq
         Generating NVIDIA GPU code
mccoordschange:
   4996, Generating acc routine seq
         Generating NVIDIA GPU code
mccoordschange_polarisation:
   5027, Generating acc routine seq
         Generating NVIDIA GPU code
normal_vec:
   5044, Generating acc routine seq
         Generating NVIDIA GPU code
solve_2nd_order:
   5143, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_circle:
   5227, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_rect_angular:
   5293, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_rect_real:
   5370, Generating acc routine seq
         Generating NVIDIA GPU code
kiss_srandom:
   5642, Generating acc routine seq
         Generating NVIDIA GPU code
kiss_random:
   5652, Generating acc routine seq
         Generating NVIDIA GPU code
_hash:
   5678, Generating acc routine seq
         Generating NVIDIA GPU code
_randnorm2:
   5719, Generating acc routine seq
         Generating NVIDIA GPU code
_randtriangle:
   5730, Generating acc routine seq
         Generating NVIDIA GPU code
_rand01:
   5735, Generating acc routine seq
         Generating NVIDIA GPU code
_randpm1:
   5743, Generating acc routine seq
         Generating NVIDIA GPU code
_rand0max:
   5751, Generating acc routine seq
         Generating NVIDIA GPU code
_randminmax:
   5758, Generating acc routine seq
         Generating NVIDIA GPU code
mcsetstate:
   6400, Generating acc routine seq
         Generating NVIDIA GPU code
mcgetstate:
   6433, Generating acc routine seq
         Generating NVIDIA GPU code
inside_rectangle:
   6494, Generating acc routine seq
         Generating NVIDIA GPU code
box_intersect:
   6510, Generating acc routine seq
         Generating NVIDIA GPU code
cylinder_intersect:
   6596, Generating acc routine seq
         Generating NVIDIA GPU code
sphere_intersect:
   6664, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Index:
   7807, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Value:
   7875, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Value2d:
   7954, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp1d:
   8422, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp1d_nearest:
   8438, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp2d:
   8456, Generating acc routine seq
         Generating NVIDIA GPU code
intersection_lens_parab:
   8481, Generating acc routine seq
         Generating NVIDIA GPU code
intersect_parab_Cyl:
   8636, Generating acc routine seq
         Generating NVIDIA GPU code
init:
  10248, Generating update device(_line_var,_source_var,_screen_var,_pt_var,_crl2d_var,_crl1d_var,_crl1dsimple_var,_crl1d_rtm_var,_screen0_var,_origin_var,_instrument_var,_crlplace_var)
class_Progress_bar_trace:
  10289, Generating acc routine seq
         Generating NVIDIA GPU code
class_Source_flat_trace:
  10380, Generating acc routine seq
         Generating NVIDIA GPU code
class_PSD_monitor_trace:
  10517, Generating acc routine seq
         Generating NVIDIA GPU code
class_Lens_simple_trace:
  10608, Generating acc routine seq
         Generating NVIDIA GPU code
class_Lens_parab_trace:
  10715, Generating acc routine seq
         Generating NVIDIA GPU code
class_Lens_parab_Cyl_trace:
  10832, Generating acc routine seq
         Generating NVIDIA GPU code
class_Lens_CRL_RTM_trace:
  10957, Generating acc routine seq
         Generating NVIDIA GPU code
raytrace:
  11106, Generating acc routine seq
         Generating NVIDIA GPU code
raytrace_all:
  11380, Generating implicit firstprivate(gpu_innerloop)
         Generating NVIDIA GPU code
      11394, #pragma acc loop gang(numgangs), vector(vecsize) /* blockIdx.x threadIdx.x */
  11380, Local memory used for .inl_particle_13360,particleN,.inl_.inl_mcphoton_0_13376,.inl_.X1918_13378,.inl_.inl_.X2116_13_13377
  11394, Generating implicit firstprivate(seed,_particle)
finally:
  12074, Generating update self(_line_var,_source_var,_screen_var,_pt_var,_crl2d_var,_crl1d_var,_crl1dsimple_var,_crl1d_rtm_var,_screen0_var,_origin_var,_instrument_var,_crlplace_var)
mcenabletrace:
   5877, Generating update device(mcdotrace)
/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/tools/../miniconda3/bin//ld: warning: /tmp/pgcudafatSa8ufefnqGpNb.o: missing .note.GNU-stack section implies executable stack
/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/tools/../miniconda3/bin//ld: NOTE: This behaviour is deprecated and will be removed in a future version of the linker
DEBUG: CMD: nvc finished
INFO: ===