INFO: No output directory specified (--dir)
INFO: Using directory: "Template_Johann_spec_20241121_064027"
INFO: Regenerating c-file: Template_Johann_spec.c
DEBUG: CMD: /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/bin/mcxtrace -t -o ./Template_Johann_spec.c Template_Johann_spec.instr
Info:    'Bragg_crystal_bent_BC' is a contributed component.
CFLAGS= -std=c99
            
-----------------------------------------------------------

Generating single GPU kernel or single CPU section layout: 

-----------------------------------------------------------

Generating GPU/CPU -DFUNNEL layout:

-----------------------------------------------------------
DEBUG: CMD: /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/bin/mcxtrace finished
INFO: Recompiling: ./Template_Johann_spec.out
DEBUG: CMD: nvc -o ./Template_Johann_spec.out ./Template_Johann_spec.c -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -Wl,-rpath-link,/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -L/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -mtune=haswell -fPIC -O2 -isystem /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/include -fast -Minfo=accel -acc=gpu -gpu=managed -DOPENACC -std=c99
"./Template_Johann_spec.c", line 4476: warning: variable "num" was declared but never referenced [declared_but_not_referenced]
          int num = 3;
              ^

Remark: individual warnings can be suppressed with "--diag_suppress <warning-name>"

"./Template_Johann_spec.c", line 6599: warning: variable "ret" was declared but never referenced [declared_but_not_referenced]
    int ret=1,stat=0,plane_stat=0;
        ^

"./Template_Johann_spec.c", line 6772: warning: variable "D" was declared but never referenced [declared_but_not_referenced]
    double A,B,C,D,k;
                 ^

"./Template_Johann_spec.c", line 8953: warning: variable "theta0" was declared but never referenced [declared_but_not_referenced]
      double lambda,theta,theta0,DeltaThetas,a,d,b,C,W,kappa,g,L;
                          ^

"./Template_Johann_spec.c", line 9415: warning: integer conversion resulted in a change of sign [integer_sign_change]
      Vars->OFF_polyidx       = -1;
                                ^

"./Template_Johann_spec.c", line 10417: warning: variable "ratio" was set but never used [set_but_not_used]
      double  ratio;
              ^

"./Template_Johann_spec.c", line 10932: warning: variable "y0" is used before its value is set [used_before_set]
              if (y0 < ymin) y0=ymin; 
                  ^

"./Template_Johann_spec.c", line 10934: warning: variable "y1" is used before its value is set [used_before_set]
              if (y1 < ymin) y1=ymin; 
                  ^

"./Template_Johann_spec.c", line 11306: warning: variable "minx" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
          ^

"./Template_Johann_spec.c", line 11306: warning: variable "maxx" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                       ^

"./Template_Johann_spec.c", line 11306: warning: variable "miny" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                     ^

"./Template_Johann_spec.c", line 11306: warning: variable "maxy" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                                  ^

"./Template_Johann_spec.c", line 11306: warning: variable "minz" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                                                ^

"./Template_Johann_spec.c", line 11306: warning: variable "maxz" was declared but never referenced [declared_but_not_referenced]
    MCNUM minx=FLT_MAX,maxx=-FLT_MAX,miny=FLT_MAX,maxy=-FLT_MAX,minz=FLT_MAX,maxz=-FLT_MAX;
                                                                             ^

"./Template_Johann_spec.c", line 11663: warning: variable "plane_Eq" was declared but never referenced [declared_but_not_referenced]
    double plane_Eq [4];
           ^

"./Template_Johann_spec.c", line 12904: warning: variable "tc2" was set but never used [set_but_not_used]
      Coords tc1, tc2;
                  ^

"./Template_Johann_spec.c", line 12892: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 1;
        ^

"./Template_Johann_spec.c", line 12945: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 2;
        ^

"./Template_Johann_spec.c", line 12994: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 3;
        ^

"./Template_Johann_spec.c", line 13043: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 4;
        ^

"./Template_Johann_spec.c", line 13117: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 5;
        ^

"./Template_Johann_spec.c", line 13180: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 6;
        ^

"./Template_Johann_spec.c", line 13258: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 7;
        ^

"./Template_Johann_spec.c", line 13317: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 8;
        ^

"./Template_Johann_spec.c", line 13413: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 9;
        ^

"./Template_Johann_spec.c", line 13509: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 10;
        ^

"./Template_Johann_spec.c", line 13605: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 11;
        ^

"./Template_Johann_spec.c", line 13794: warning: variable "status" was set but never used [set_but_not_used]
      int status=0;
          ^

"./Template_Johann_spec.c", line 13907: warning: variable "i" was declared but never referenced [declared_but_not_referenced]
      int i,j;
          ^

"./Template_Johann_spec.c", line 13907: warning: variable "j" was declared but never referenced [declared_but_not_referenced]
      int i,j;
            ^

"./Template_Johann_spec.c", line 13908: warning: variable "p1" was declared but never referenced [declared_but_not_referenced]
      double *p1,*p2,*p3;
              ^

"./Template_Johann_spec.c", line 13908: warning: variable "p2" was declared but never referenced [declared_but_not_referenced]
      double *p1,*p2,*p3;
                  ^

"./Template_Johann_spec.c", line 13908: warning: variable "p3" was declared but never referenced [declared_but_not_referenced]
      double *p1,*p2,*p3;
                      ^

"./Template_Johann_spec.c", line 13988: warning: variable "status" was set but never used [set_but_not_used]
      int status;
          ^

"./Template_Johann_spec.c", line 14076: warning: variable "i" was declared but never referenced [declared_but_not_referenced]
    int i,j;
        ^

"./Template_Johann_spec.c", line 14076: warning: variable "j" was declared but never referenced [declared_but_not_referenced]
    int i,j;
          ^

"./Template_Johann_spec.c", line 14526: warning: variable "kk" was declared but never referenced [declared_but_not_referenced]
    double kk,theta_x,theta_y,l,e,k;
           ^

"./Template_Johann_spec.c", line 14703: warning: variable "k" was declared but never referenced [declared_but_not_referenced]
      int i,j,k;
              ^

"./Template_Johann_spec.c", line 14704: warning: variable "e" was declared but never referenced [declared_but_not_referenced]
      double e,p2;
             ^

"./Template_Johann_spec.c", line 14878: warning: variable "grad_x" was declared but never referenced [declared_but_not_referenced]
              double grad_x, grad_y, grad_z;
                     ^

"./Template_Johann_spec.c", line 14878: warning: variable "grad_y" was declared but never referenced [declared_but_not_referenced]
              double grad_x, grad_y, grad_z;
                             ^

"./Template_Johann_spec.c", line 14878: warning: variable "grad_z" was declared but never referenced [declared_but_not_referenced]
              double grad_x, grad_y, grad_z;
                                     ^

"./Template_Johann_spec.c", line 14883: warning: variable "l_grad_x" was declared but never referenced [declared_but_not_referenced]
              double l_grad_x, l_grad_y, l_grad_z;
                     ^

"./Template_Johann_spec.c", line 14883: warning: variable "l_grad_y" was declared but never referenced [declared_but_not_referenced]
              double l_grad_x, l_grad_y, l_grad_z;
                               ^

"./Template_Johann_spec.c", line 14883: warning: variable "l_grad_z" was declared but never referenced [declared_but_not_referenced]
              double l_grad_x, l_grad_y, l_grad_z;
                                         ^

"./Template_Johann_spec.c", line 14900: warning: variable "fail" was set but never used [set_but_not_used]
              int fail;
                  ^

"./Template_Johann_spec.c", line 14855: warning: variable "yy0" was set but never used [set_but_not_used]
          double xx0, xx1, yy0, yy1, zz0, zz1; /* we will have to tentatively propagate twice to see which surface we hit */
                           ^

"./Template_Johann_spec.c", line 14855: warning: variable "yy1" was set but never used [set_but_not_used]
          double xx0, xx1, yy0, yy1, zz0, zz1; /* we will have to tentatively propagate twice to see which surface we hit */
                                ^

"./Template_Johann_spec.c", line 14817: warning: variable "x_int" was declared but never referenced [declared_but_not_referenced]
      double x_int,y_int,z_int;		// intersection with the y=0 plane
             ^

"./Template_Johann_spec.c", line 14817: warning: variable "y_int" was declared but never referenced [declared_but_not_referenced]
      double x_int,y_int,z_int;		// intersection with the y=0 plane
                   ^

"./Template_Johann_spec.c", line 14817: warning: variable "z_int" was declared but never referenced [declared_but_not_referenced]
      double x_int,y_int,z_int;		// intersection with the y=0 plane
                         ^

"./Template_Johann_spec.c", line 16554: warning: variable "aa" was declared but never referenced [declared_but_not_referenced]
    double aa,bb,cc;
           ^

"./Template_Johann_spec.c", line 16554: warning: variable "bb" was declared but never referenced [declared_but_not_referenced]
    double aa,bb,cc;
              ^

"./Template_Johann_spec.c", line 16554: warning: variable "cc" was declared but never referenced [declared_but_not_referenced]
    double aa,bb,cc;
                 ^

"./Template_Johann_spec.c", line 16995: warning: variable "t" was declared but never referenced [declared_but_not_referenced]
    time_t  t;
            ^

"./Template_Johann_spec.c", line 16996: warning: variable "ct" was set but never used [set_but_not_used]
    clock_t ct;
            ^

"./Template_Johann_spec.c", line 1485: warning: variable "mcstartdate" was set but never used [set_but_not_used]
  static   long mcstartdate            = 0; /* start simulation time */
                ^

"./Template_Johann_spec.c", line 2888: warning: function "strcpy_valid" was declared but never referenced [declared_but_not_referenced]
  static char *strcpy_valid(char *valid, char *original)
               ^

mcgenstate:
     84, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getvar:
     98, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getvar_void:
    131, Generating acc routine seq
         Generating NVIDIA GPU code
particle_setvar_void:
    156, Generating acc routine seq
         Generating NVIDIA GPU code
particle_setvar_void_array:
    179, Generating acc routine seq
         Generating NVIDIA GPU code
particle_restore:
    190, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getuservar_byid:
    199, Generating acc routine seq
         Generating NVIDIA GPU code
particle_uservar_init:
    209, Generating acc routine seq
         Generating NVIDIA GPU code
noprintf:
   1532, Generating acc routine seq
         Generating NVIDIA GPU code
str_comp:
   1536, Generating acc routine seq
         Generating NVIDIA GPU code
str_len:
   1545, Generating acc routine seq
         Generating NVIDIA GPU code
mcget_ncount:
   4097, Generating acc routine seq
         Generating NVIDIA GPU code
coords_set:
   4528, Generating acc routine seq
         Generating NVIDIA GPU code
coords_get:
   4539, Generating acc routine seq
         Generating NVIDIA GPU code
coords_add:
   4548, Generating acc routine seq
         Generating NVIDIA GPU code
coords_sub:
   4560, Generating acc routine seq
         Generating NVIDIA GPU code
coords_neg:
   4572, Generating acc routine seq
         Generating NVIDIA GPU code
coords_scale:
   4582, Generating acc routine seq
         Generating NVIDIA GPU code
coords_sp:
   4592, Generating acc routine seq
         Generating NVIDIA GPU code
coords_xp:
   4600, Generating acc routine seq
         Generating NVIDIA GPU code
coords_len:
   4610, Generating acc routine seq
         Generating NVIDIA GPU code
coords_print:
   4632, Generating acc routine seq
         Generating NVIDIA GPU code
coords_norm:
   4639, Generating acc routine seq
         Generating NVIDIA GPU code
rot_set_rotation:
   4685, Generating acc routine seq
         Generating NVIDIA GPU code
rot_test_identity:
   4720, Generating acc routine seq
         Generating NVIDIA GPU code
rot_mul:
   4731, Generating acc routine seq
         Generating NVIDIA GPU code
rot_copy:
   4748, Generating acc routine seq
         Generating NVIDIA GPU code
rot_transpose:
   4759, Generating acc routine seq
         Generating NVIDIA GPU code
rot_apply:
   4775, Generating acc routine seq
         Generating NVIDIA GPU code
vec_prod_func:
   4804, Generating acc routine seq
         Generating NVIDIA GPU code
scalar_prod:
   4815, Generating acc routine seq
         Generating NVIDIA GPU code
norm_func:
   4819, Generating acc routine seq
         Generating NVIDIA GPU code
mccoordschange:
   4996, Generating acc routine seq
         Generating NVIDIA GPU code
mccoordschange_polarisation:
   5027, Generating acc routine seq
         Generating NVIDIA GPU code
normal_vec:
   5044, Generating acc routine seq
         Generating NVIDIA GPU code
solve_2nd_order:
   5143, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_circle:
   5227, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_rect_angular:
   5293, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_rect_real:
   5370, Generating acc routine seq
         Generating NVIDIA GPU code
kiss_srandom:
   5642, Generating acc routine seq
         Generating NVIDIA GPU code
kiss_random:
   5652, Generating acc routine seq
         Generating NVIDIA GPU code
_hash:
   5678, Generating acc routine seq
         Generating NVIDIA GPU code
_randnorm2:
   5719, Generating acc routine seq
         Generating NVIDIA GPU code
_randtriangle:
   5730, Generating acc routine seq
         Generating NVIDIA GPU code
_rand01:
   5735, Generating acc routine seq
         Generating NVIDIA GPU code
_randpm1:
   5743, Generating acc routine seq
         Generating NVIDIA GPU code
_rand0max:
   5751, Generating acc routine seq
         Generating NVIDIA GPU code
_randminmax:
   5758, Generating acc routine seq
         Generating NVIDIA GPU code
mcsetstate:
   6400, Generating acc routine seq
         Generating NVIDIA GPU code
mcgetstate:
   6433, Generating acc routine seq
         Generating NVIDIA GPU code
inside_rectangle:
   6494, Generating acc routine seq
         Generating NVIDIA GPU code
box_intersect:
   6510, Generating acc routine seq
         Generating NVIDIA GPU code
cylinder_intersect:
   6596, Generating acc routine seq
         Generating NVIDIA GPU code
sphere_intersect:
   6664, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Index:
   7811, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Value:
   7879, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Value2d:
   7958, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp1d:
   8426, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp1d_nearest:
   8442, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp2d:
   8460, Generating acc routine seq
         Generating NVIDIA GPU code
Mx_CubicCrystalChi:
   8539, Generating acc routine seq
         Generating NVIDIA GPU code
Mx_DarwinReflectivityBC:
   8628, Generating acc routine seq
         Generating NVIDIA GPU code
cross:
   8696, Generating acc routine seq
         Generating NVIDIA GPU code
Mx_DiffractionDispersion:
   8711, Generating acc routine seq
         Generating NVIDIA GPU code
Mx_LaueReflectivityBC:
   8844, Generating acc routine seq
         Generating NVIDIA GPU code
Mx_DarwinReflectivity:
   8951, Generating acc routine seq
         Generating NVIDIA GPU code
Monitor_nD_Trace:
  10010, Generating acc routine seq
         Generating NVIDIA GPU code
off_F:
  11263, Generating acc routine seq
         Generating NVIDIA GPU code
off_sign:
  11268, Generating acc routine seq
         Generating NVIDIA GPU code
off_normal:
  11278, Generating acc routine seq
         Generating NVIDIA GPU code
off_pnpoly:
  11304, Generating acc routine seq
         Generating NVIDIA GPU code
off_intersectPoly:
  11367, Generating acc routine seq
         Generating NVIDIA GPU code
off_init_planes:
  11498, Generating acc routine seq
         Generating NVIDIA GPU code
off_clip_3D_mod:
  11543, Generating acc routine seq
         Generating NVIDIA GPU code
off_clip_3D_mod_grav:
  11660, Generating acc routine seq
         Generating NVIDIA GPU code
off_compare:
  11778, Generating acc routine seq
         Generating NVIDIA GPU code
off_cleanDouble:
  11790, Generating acc routine seq
         Generating NVIDIA GPU code
off_cleanInOut:
  11825, Generating acc routine seq
         Generating NVIDIA GPU code
Min_int:
  12076, Generating acc routine seq
         Generating NVIDIA GPU code
merge:
  12083, Generating acc routine seq
         Generating NVIDIA GPU code
p_to_quadratic:
  12187, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
quadraticSolve:
  12202, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
off_intersect_all:
  12256, Generating acc routine seq
         Generating NVIDIA GPU code
off_intersect:
  12373, Generating acc routine seq
         Generating NVIDIA GPU code
off_x_intersect:
  12395, Generating acc routine seq
         Generating NVIDIA GPU code
init:
  14355, Generating update device(_instrument_var,_origin_var,_bc_var,_src_var,_s_arm_var,_analyzer_psd_var,_det_var,_det4_var,_d_arm_var,_det2_var,_det3_var,_fpi_var)
class_Progress_bar_trace:
  14396, Generating acc routine seq
         Generating NVIDIA GPU code
class_Source_div_trace:
  14487, Generating acc routine seq
         Generating NVIDIA GPU code
class_PSD_monitor_trace:
  14683, Generating acc routine seq
         Generating NVIDIA GPU code
class_Bragg_crystal_bent_BC_trace:
  14774, Generating acc routine seq
         Generating NVIDIA GPU code
class_PSD_monitor_4PI_trace:
  15037, Generating acc routine seq
         Generating NVIDIA GPU code
class_Monitor_nD_trace:
  15110, Generating acc routine seq
         Generating NVIDIA GPU code
raytrace:
  15333, Generating acc routine seq
         Generating NVIDIA GPU code
raytrace_all:
  15587, Generating implicit firstprivate(gpu_innerloop)
         Generating NVIDIA GPU code
      15601, #pragma acc loop gang(numgangs), vector(vecsize) /* blockIdx.x threadIdx.x */
  15587, Local memory used for .inl_particle_15233,particleN,.inl_.inl_mcphoton_0_15249,.inl_.X2092_15251,.inl_.inl_.X2296_13_15250
  15601, Generating implicit firstprivate(seed,_particle)
finally:
  16288, Generating update self(_instrument_var,_origin_var,_bc_var,_s_arm_var,_src_var,_analyzer_psd_var,_det_var,_det4_var,_d_arm_var,_det2_var,_det3_var,_fpi_var)
mcenabletrace:
   5877, Generating update device(mcdotrace)
/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/tools/../miniconda3/bin//ld: warning: /tmp/pgcudafatUKfqbkOrJY4uS.o: missing .note.GNU-stack section implies executable stack
/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/tools/../miniconda3/bin//ld: NOTE: This behaviour is deprecated and will be removed in a future version of the linker
DEBUG: CMD: nvc finished
INFO: ===