INFO: No output directory specified (--dir)
INFO: Using directory: "Test_source_spectra_20250426_065936"
INFO: Regenerating c-file: Test_source_spectra.c
WARNING: Full-path code-generator "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/bin/mcxtrace-antlr -I${MCXTRACE}" not found!!
WARNING: Attempting replacement by "mcxtrace-antlr -I${MCXTRACE}"
DEBUG: CMD: mcxtrace-antlr -I${MCXTRACE} -t -o ./Test_source_spectra.c Test_source_spectra.instr
line 2:2 extraneous input '%' expecting {<EOF>, '__extension__', '__m128', '__m128d', '__m128i', '__typeof__', '__inline__', '__stdcall', '__declspec', '__cdecl', '__clrcall', '__fastcall', '__thiscall', '__vectorcall', '__attribute__', 'auto', 'char', 'const', 'double', 'enum', 'extern', 'float', 'inline', 'int', 'long', 'register', 'restrict', 'short', 'signed', 'static', 'struct', 'typedef', 'union', 'unsigned', 'void', 'volatile', '_Alignas', '_Atomic', '_Bool', '_Complex', '_Noreturn', '_Static_assert', '_Thread_local', '(', '*', '^', ';', Identifier}
2025-04-26 06:59:54.402 | ERROR    | mccode_antlr.translators.c_listener:syntaxError:35 - Syntax error in parsing 2,2
2025-04-26 06:59:54.402 | ERROR    | mccode_antlr.translators.c_listener:syntaxError:41 - ~~^ extraneous input '%' expecting {<EOF>, '__extension__', '__m128', '__m128d', '__m128i', '__typeof__', '__inline__', '__stdcall', '__declspec', '__cdecl', '__clrcall', '__fastcall', '__thiscall', '__vectorcall', '__attribute__', 'auto', 'char', 'const', 'double', 'enum', 'extern', 'float', 'inline', 'int', 'long', 'register', 'restrict', 'short', 'signed', 'static', 'struct', 'typedef', 'union', 'unsigned', 'void', 'volatile', '_Alignas', '_Atomic', '_Bool', '_Complex', '_Noreturn', '_Static_assert', '_Thread_local', '(', '*', '^', ';', Identifier}
2025-04-26 06:59:54.403 | INFO     | mccode_antlr.translators.c_listener:syntaxError:43 - 
2025-04-26 06:59:54.403 | INFO     | mccode_antlr.translators.c_listener:syntaxError:43 -   int source_spectra_find_offset(char * fn){
line 2:11 no viable alternative at input 'include "read_table-lib"'
2025-04-26 06:59:54.456 | ERROR    | mccode_antlr.translators.c_listener:syntaxError:35 - Syntax error in parsing 2,11
2025-04-26 06:59:54.457 | ERROR    | mccode_antlr.translators.c_listener:syntaxError:41 - ~~~~~~~~~~~^ no viable alternative at input 'include "read_table-lib"'
2025-04-26 06:59:54.457 | INFO     | mccode_antlr.translators.c_listener:syntaxError:43 - 
2025-04-26 06:59:54.457 | INFO     | mccode_antlr.translators.c_listener:syntaxError:43 -   int source_spectra_find_offset(char * fn){
No initialization present?

-----------------------------------------------------------

Generating single GPU kernel or single CPU section layout:

-----------------------------------------------------------

Generating GPU/CPU -DFUNNEL layout:
-> GPU kernel from component origin
-> GPU kernel from component ss
-> GPU kernel from component ss4d
-> GPU kernel from component psd0
-> GPU kernel from component emon0
-> GPU kernel from component psd1
-> GPU kernel from component psd2

-----------------------------------------------------------
DEBUG: CMD: mcxtrace-antlr -I${MCXTRACE} finished
INFO: Recompiling: ./Test_source_spectra.out
DEBUG: CMD: mpicc -o ./Test_source_spectra.out ./Test_source_spectra.c -lm -DUSE_MPI -lmpi -fno-PIC -fPIE -flto -O3 -mtune=native -march=native -fno-math-errno -ftree-vectorize -g -DNDEBUG -D_POSIX_SOURCE -std=c99 -lm
./Test_source_spectra.c:5619:6: error: conflicting types for 'mt_srandom'; have 'void(uint32_t)' {aka 'void(unsigned int)'}
 5619 | void mt_srandom(uint32_t seed) {
      |      ^~~~~~~~~~
./Test_source_spectra.c:887:6: note: previous declaration of 'mt_srandom' with type 'void(long unsigned int)'
  887 | void mt_srandom (unsigned long x);
      |      ^~~~~~~~~~
./Test_source_spectra.c:5657:10: error: conflicting types for 'mt_random'; have 'uint32_t(void)' {aka 'unsigned int(void)'}
 5657 | uint32_t mt_random(void) {
      |          ^~~~~~~~~
./Test_source_spectra.c:886:15: note: previous declaration of 'mt_random' with type 'long unsigned int(void)'
  886 | unsigned long mt_random(void);
      |               ^~~~~~~~~
./Test_source_spectra.c:7014:3: error: expected identifier or '(' before '%' token
 7014 |   %include "read_table-lib";
      |   ^
./Test_source_spectra.c: In function 'source_spectra_find_offset':
./Test_source_spectra.c:7024:15: warning: implicit declaration of function 'Open_File' [-Wimplicit-function-declaration]
 7024 |       if( (fs=Open_File(fn,"rb",NULL))==NULL){
      |               ^~~~~~~~~
./Test_source_spectra.c:7024:14: warning: assignment to 'FILE *' from 'int' makes pointer from integer without a cast [-Wint-conversion]
 7024 |       if( (fs=Open_File(fn,"rb",NULL))==NULL){
      |              ^
./Test_source_spectra.c: At top level:
./Test_source_spectra.c:7057:33: error: unknown type name 't_Table'
 7057 |   double interpolate_4d_spectra(t_Table data, int *idx,int *N, double *alpha){
      |                                 ^~~~~~~
./Test_source_spectra.c:7150:3: error: unknown type name 't_Table'
 7150 |   t_Table * xproj;
      |   ^~~~~~~
./Test_source_spectra.c:7151:3: error: unknown type name 't_Table'
 7151 |   t_Table * yproj;
      |   ^~~~~~~
./Test_source_spectra.c:7152:3: error: unknown type name 't_Table'
 7152 |   t_Table * map;
      |   ^~~~~~~
./Test_source_spectra.c: In function 'class_Source_spectra_initialize':
./Test_source_spectra.c:7898:11: warning: 'return' with a value, in function returning void
 7898 |     return(_comp);
      |           ^
./Test_source_spectra.c:7849:6: note: declared here
 7849 | void class_Source_spectra_initialize(_class_Source_spectra *_comp) {
      |      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Test_source_spectra.c:7909:28: error: 't_Table' undeclared (first use in this function)
 7909 |     xproj=calloc(nE,sizeof(t_Table));
      |                            ^~~~~~~
./Test_source_spectra.c:7909:28: note: each undeclared identifier is reported only once for each function it appears in
./Test_source_spectra.c:7924:20: warning: implicit declaration of function 'Table_Read_Offset' [-Wimplicit-function-declaration]
 7924 |       if ( (status=Table_Read_Offset(&(xproj[num]),fnx,0,&offset,0))==-1){
      |                    ^~~~~~~~~~~~~~~~~
./Test_source_spectra.c:7937:28: error: request for member 'rows' in something not a structure or union
 7937 |       for (r=0;r<xproj[num].rows;r++){
      |                            ^
./Test_source_spectra.c:7938:18: warning: implicit declaration of function 'Table_Index' [-Wimplicit-function-declaration]
 7938 |         Ix[num]+=Table_Index(xproj[num],r,brilliance_column);//xproj.data[r*xproj.columns+ brilliance_column];
      |                  ^~~~~~~~~~~
./Test_source_spectra.c:7941:28: error: request for member 'rows' in something not a structure or union
 7941 |       for (r=0;r<yproj[num].rows;r++){
      |                            ^
./Test_source_spectra.c:7955:30: error: request for member 'rows' in something not a structure or union
 7955 |           for (r=0;r<xproj[0].rows;r++){
      |                              ^
./Test_source_spectra.c:7968:23: error: request for member 'rows' in something not a structure or union
 7968 |           npx=xproj[0].rows/nx;
      |                       ^
./Test_source_spectra.c:7971:31: error: request for member 'rows' in something not a structure or union
 7971 |         if( nx*npx != xproj[0].rows){
      |                               ^
./Test_source_spectra.c:7972:175: error: request for member 'rows' in something not a structure or union
 7972 |           fprintf(stderr,"Error (%s): number of read rows (%d) in %s does not match nx*npx = ( %d * %d). Please check the input files. Aborting.\n",NAME_CURRENT_COMP,xproj[0].rows,fnx,nx,npx);
      |                                                                                                                                                                               ^
./Test_source_spectra.c:7978:30: error: request for member 'rows' in something not a structure or union
 7978 |           for (r=0;r<yproj[0].rows;r++){
      |                              ^
./Test_source_spectra.c:7990:23: error: request for member 'rows' in something not a structure or union
 7990 |           npy=yproj[0].rows/ny;
      |                       ^
./Test_source_spectra.c:7992:31: error: request for member 'rows' in something not a structure or union
 7992 |         if( ny*npy != yproj[0].rows){
      |                               ^
./Test_source_spectra.c:7993:175: error: request for member 'rows' in something not a structure or union
 7993 |           fprintf(stderr,"ERROR (%s): number of read rows (%d) in %s does not match ny*npy = ( %d * %d). Please check the input files. Aborting.\n",NAME_CURRENT_COMP,yproj[0].rows,fny,ny,npy);
      |                                                                                                                                                                               ^
./Test_source_spectra.c:8002:14: error: 'xptr' undeclared (first use in this function)
 8002 |     t_Table *xptr=&(xproj[0]);
      |              ^~~~
./Test_source_spectra.c:8003:14: error: 'yptr' undeclared (first use in this function)
 8003 |     t_Table *yptr=&(yproj[0]);
      |              ^~~~
./Test_source_spectra.c:8040:26: error: request for member 'rows' in something not a structure or union
 8040 |       for (r=0;r<map[num].rows;r++){
      |                          ^
./Test_source_spectra.c:8047:22: error: request for member 'rows' in something not a structure or union
 8047 |     for (r=0;r<map[0].rows;r++){
      |                      ^
./Test_source_spectra.c:8076:17: error: request for member 'rows' in something not a structure or union
 8076 |       npy=map[0].rows/(nx*ny*npx);
      |                 ^
./Test_source_spectra.c:8082:35: error: request for member 'rows' in something not a structure or union
 8082 |     xmax=Table_Index(map[0],map[0].rows,0);
      |                                   ^
./Test_source_spectra.c:8085:35: error: request for member 'rows' in something not a structure or union
 8085 |     ymax=Table_Index(map[0],map[0].rows,1);
      |                                   ^
./Test_source_spectra.c:8088:36: error: request for member 'rows' in something not a structure or union
 8088 |     xpmax=Table_Index(map[0],map[0].rows,2);
      |                                    ^
./Test_source_spectra.c:8091:36: error: request for member 'rows' in something not a structure or union
 8091 |     ypmax=Table_Index(map[0],map[0].rows,3);
      |                                    ^
./Test_source_spectra.c: In function 'class_Source_spectra_trace':
./Test_source_spectra.c:8486:3: error: unknown type name 't_Table'
 8486 |   t_Table *xptr,*yptr;
      |   ^~~~~~~
./Test_source_spectra.c:8573:14: warning: implicit declaration of function 'interpolate_4d_spectra' [-Wimplicit-function-declaration]
 8573 |       pe[ie]=interpolate_4d_spectra(map[num+ie],idx,NN,alpha)*xstep*ystep*1e-6 *xpstep*ypstep*1e-6;
      |              ^~~~~~~~~~~~~~~~~~~~~~
./Test_source_spectra.c: In function 'class_Source_spectra_finally':
./Test_source_spectra.c:9560:7: warning: implicit declaration of function 'Table_Free' [-Wimplicit-function-declaration]
 9560 |       Table_Free(xproj);
      |       ^~~~~~~~~~
INFO: call to mpicc failed with Command 'mpicc -o ./Test_source_spectra.out ./Test_source_spectra.c -lm -DUSE_MPI -lmpi -fno-PIC -fPIE -flto -O3 -mtune=native -march=native -fno-math-errno -ftree-vectorize -g -DNDEBUG -D_POSIX_SOURCE -std=c99 -lm' returned non-zero exit status 1.
Traceback (most recent call last):
  File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/mxrun.py", line 616, in <module>
    main()
  File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/mxrun.py", line 524, in main
    mcstas.prepare(options)
  File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/mccode.py", line 311, in prepare
    Process(lexer.quote(options.cc)).run(args)
  File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/mccode.py", line 77, in run
    raise err
  File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/mccode.py", line 73, in run
    proc = run(command, shell=True, check=True, text=True, capture_output=pipe)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib/python3.12/subprocess.py", line 571, in run
    raise CalledProcessError(retcode, process.args,
subprocess.CalledProcessError: Command 'mpicc -o ./Test_source_spectra.out ./Test_source_spectra.c -lm -DUSE_MPI -lmpi -fno-PIC -fPIE -flto -O3 -mtune=native -march=native -fno-math-errno -ftree-vectorize -g -DNDEBUG -D_POSIX_SOURCE -std=c99 -lm' returned non-zero exit status 1.