INFO: No output directory specified (--dir)
INFO: Using directory: "Test_SX_20250426_065500"
INFO: Regenerating c-file: Test_SX.c
WARNING: Full-path code-generator "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/bin/mcxtrace-antlr -I${MCXTRACE}" not found!!
WARNING: Attempting replacement by "mcxtrace-antlr -I${MCXTRACE}"
DEBUG: CMD: mcxtrace-antlr -I${MCXTRACE} -t -o ./Test_SX.c Test_SX.instr
2025-04-26 06:55:22.769 | DEBUG    | mccode_antlr.translators.c:sort_include_hierarchy:41 - sort includes :Source_flat(0):read_table-lib :Single_crystal(0):read_table-lib :Single_crystal(1):interoff-lib
2025-04-26 06:55:22.769 | DEBUG    | mccode_antlr.translators.c:sort_include_hierarchy:66 - sorted to read_table-lib  interoff-lib
2025-04-26 06:55:22.770 | DEBUG    | mccode_antlr.translators.c:sort_include_hierarchy:66 - sorted to read_table-lib  interoff-lib
2025-04-26 06:55:25.478 | INFO     | mccode_antlr.translators.c_listener:visitDeclarator:341 - Could not convert an integer from ('MCSX_REFL_SLIST_SIZE',) due to invalid literal for int() with base 10: 'MCSX_REFL_SLIST_SIZE'
No initialization present?

-----------------------------------------------------------

Generating single GPU kernel or single CPU section layout:

-----------------------------------------------------------

Generating GPU/CPU -DFUNNEL layout:
-> GPU kernel from component src
-> GPU kernel from component psd0
-> GPU kernel from component sample
-> GPU kernel from component psd4pi

-----------------------------------------------------------
DEBUG: CMD: mcxtrace-antlr -I${MCXTRACE} finished
INFO: Recompiling: ./Test_SX.out
DEBUG: CMD: mpicc -o ./Test_SX.out ./Test_SX.c -lm -DUSE_MPI -lmpi -fno-PIC -fPIE -flto -O3 -mtune=native -march=native -fno-math-errno -ftree-vectorize -g -DNDEBUG -D_POSIX_SOURCE -std=c99 -lm
./Test_SX.c:5619:6: error: conflicting types for 'mt_srandom'; have 'void(uint32_t)' {aka 'void(unsigned int)'}
 5619 | void mt_srandom(uint32_t seed) {
      |      ^~~~~~~~~~
./Test_SX.c:887:6: note: previous declaration of 'mt_srandom' with type 'void(long unsigned int)'
  887 | void mt_srandom (unsigned long x);
      |      ^~~~~~~~~~
./Test_SX.c:5657:10: error: conflicting types for 'mt_random'; have 'uint32_t(void)' {aka 'unsigned int(void)'}
 5657 | uint32_t mt_random(void) {
      |          ^~~~~~~~~
./Test_SX.c:886:15: note: previous declaration of 'mt_random' with type 'long unsigned int(void)'
  886 | unsigned long mt_random(void);
      |               ^~~~~~~~~
./Test_SX.c: In function 'cif2hkl':
./Test_SX.c:7490:22: warning: implicit declaration of function 'Open_File' [-Wimplicit-function-declaration]
 7490 |     FILE *f_infile = Open_File(infile, "r", inpath);
      |                      ^~~~~~~~~
./Test_SX.c:7490:22: warning: initialization of 'FILE *' from 'int' makes pointer from integer without a cast [-Wint-conversion]
./Test_SX.c:7527:18: warning: initialization of 'FILE *' from 'int' makes pointer from integer without a cast [-Wint-conversion]
 7527 |     FILE *file = Open_File(OUTFILE,"r", NULL);
      |                  ^~~~~~~~~
./Test_SX.c: At top level:
./Test_SX.c:8615:9: error: conflicting types for 'Open_File'; have 'FILE *(char *, const char *, char *)'
 8615 |   FILE *Open_File(char *File, const char *Mode, char *Path)
      |         ^~~~~~~~~
./Test_SX.c:7490:22: note: previous implicit declaration of 'Open_File' with type 'int()'
 7490 |     FILE *f_infile = Open_File(infile, "r", inpath);
      |                      ^~~~~~~~~
INFO: call to mpicc failed with Command 'mpicc -o ./Test_SX.out ./Test_SX.c -lm -DUSE_MPI -lmpi -fno-PIC -fPIE -flto -O3 -mtune=native -march=native -fno-math-errno -ftree-vectorize -g -DNDEBUG -D_POSIX_SOURCE -std=c99 -lm' returned non-zero exit status 1.
Traceback (most recent call last):
  File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/mxrun.py", line 616, in <module>
    main()
  File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/mxrun.py", line 524, in main
    mcstas.prepare(options)
  File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/mccode.py", line 311, in prepare
    Process(lexer.quote(options.cc)).run(args)
  File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/mccode.py", line 77, in run
    raise err
  File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/mccode.py", line 73, in run
    proc = run(command, shell=True, check=True, text=True, capture_output=pipe)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib/python3.12/subprocess.py", line 571, in run
    raise CalledProcessError(retcode, process.args,
subprocess.CalledProcessError: Command 'mpicc -o ./Test_SX.out ./Test_SX.c -lm -DUSE_MPI -lmpi -fno-PIC -fPIE -flto -O3 -mtune=native -march=native -fno-math-errno -ftree-vectorize -g -DNDEBUG -D_POSIX_SOURCE -std=c99 -lm' returned non-zero exit status 1.