INFO: No output directory specified (--dir)
INFO: Using directory: "SAXS_saxlab_20250514_113746"
INFO: Regenerating c-file: SAXS_saxlab.c
DEBUG: CMD: /home/willend/micromamba/bin/mcxtrace -t -o ./SAXS_saxlab.c SAXS_saxlab.instr
CFLAGS=
     
-----------------------------------------------------------

Generating single GPU kernel or single CPU section layout: 

-----------------------------------------------------------

Generating GPU/CPU -DFUNNEL layout:

-----------------------------------------------------------
DEBUG: CMD: /home/willend/micromamba/bin/mcxtrace finished
INFO: Recompiling: ./SAXS_saxlab.out
DEBUG: CMD: nvc -o ./SAXS_saxlab.out ./SAXS_saxlab.c -lm -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,/home/willend/micromamba/lib -Wl,-rpath-link,/home/willend/micromamba/lib -L/home/willend/micromamba/lib -mtune=haswell -fPIC -O2 -isystem /home/willend/micromamba/include -fast -Minfo=accel -acc=gpu -gpu=mem:managed -DOPENACC
"./SAXS_saxlab.c", line 4561: warning: variable "num" was declared but never referenced [declared_but_not_referenced]
          int num = 3;
              ^

Remark: individual warnings can be suppressed with "--diag_suppress <warning-name>"

"./SAXS_saxlab.c", line 6262: warning: variable "status" was set but never used [set_but_not_used]
        int status;
            ^

"./SAXS_saxlab.c", line 6713: warning: variable "ret" was declared but never referenced [declared_but_not_referenced]
    int ret=1,stat=0,plane_stat=0;
        ^

"./SAXS_saxlab.c", line 6886: warning: variable "D" was declared but never referenced [declared_but_not_referenced]
    double A,B,C,D,k;
                 ^

"./SAXS_saxlab.c", line 9038: warning: variable "tc2" was set but never used [set_but_not_used]
      Coords tc1, tc2;
                  ^

"./SAXS_saxlab.c", line 9026: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 1;
        ^

"./SAXS_saxlab.c", line 9083: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 2;
        ^

"./SAXS_saxlab.c", line 9171: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 3;
        ^

"./SAXS_saxlab.c", line 9239: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 4;
        ^

"./SAXS_saxlab.c", line 9313: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 5;
        ^

"./SAXS_saxlab.c", line 9362: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 6;
        ^

"./SAXS_saxlab.c", line 9411: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 7;
        ^

"./SAXS_saxlab.c", line 9460: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 8;
        ^

"./SAXS_saxlab.c", line 9528: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 9;
        ^

"./SAXS_saxlab.c", line 9577: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 10;
        ^

"./SAXS_saxlab.c", line 9651: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 11;
        ^

"./SAXS_saxlab.c", line 9725: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 12;
        ^

"./SAXS_saxlab.c", line 9797: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 13;
        ^

"./SAXS_saxlab.c", line 9871: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 14;
        ^

"./SAXS_saxlab.c", line 9943: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 15;
        ^

"./SAXS_saxlab.c", line 10015: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 16;
        ^

"./SAXS_saxlab.c", line 10089: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 17;
        ^

"./SAXS_saxlab.c", line 10161: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced]
    int current_setpos_index = 18;
        ^

"./SAXS_saxlab.c", line 10318: warning: variable "status" was set but never used [set_but_not_used]
      int status=0;
          ^

"./SAXS_saxlab.c", line 10445: warning: variable "i" was declared but never referenced [declared_but_not_referenced]
      int i;
          ^

"./SAXS_saxlab.c", line 10568: warning: variable "status" was set but never used [set_but_not_used]
    int status=0;
        ^

"./SAXS_saxlab.c", line 10616: warning: variable "i" was declared but never referenced [declared_but_not_referenced]
      int i,j;
          ^

"./SAXS_saxlab.c", line 10616: warning: variable "j" was declared but never referenced [declared_but_not_referenced]
      int i,j;
            ^

"./SAXS_saxlab.c", line 10617: warning: variable "p1" was declared but never referenced [declared_but_not_referenced]
      double *p1,*p2,*p3;
              ^

"./SAXS_saxlab.c", line 10617: warning: variable "p2" was declared but never referenced [declared_but_not_referenced]
      double *p1,*p2,*p3;
                  ^

"./SAXS_saxlab.c", line 10617: warning: variable "p3" was declared but never referenced [declared_but_not_referenced]
      double *p1,*p2,*p3;
                      ^

"./SAXS_saxlab.c", line 10939: warning: variable "z1" was set but never used [set_but_not_used]
    double xx,yy,x1,y1,z1;
                       ^

"./SAXS_saxlab.c", line 10941: warning: variable "F1" was declared but never referenced [declared_but_not_referenced]
    double F1=1.0;
           ^

"./SAXS_saxlab.c", line 11415: warning: variable "dSingle" was set but never used [set_but_not_used]
          double dSingle,lambda;	// dSingle - thickness of one layer of the multilayer, AA
                 ^

"./SAXS_saxlab.c", line 11256: warning: variable "A" was declared but never referenced [declared_but_not_referenced]
    double A,B,C,D,l01,l11,l02,l12;
           ^

"./SAXS_saxlab.c", line 11256: warning: variable "B" was declared but never referenced [declared_but_not_referenced]
    double A,B,C,D,l01,l11,l02,l12;
             ^

"./SAXS_saxlab.c", line 11256: warning: variable "C" was declared but never referenced [declared_but_not_referenced]
    double A,B,C,D,l01,l11,l02,l12;
               ^

"./SAXS_saxlab.c", line 11256: warning: variable "D" was declared but never referenced [declared_but_not_referenced]
    double A,B,C,D,l01,l11,l02,l12;
                 ^

"./SAXS_saxlab.c", line 11257: warning: variable "x_test1" was set but never used [set_but_not_used]
    double x_test1,y_test1,z_test1,x_test2,y_test2,z_test2,dist;	// intersection with the elliptical surface
           ^

"./SAXS_saxlab.c", line 11257: warning: variable "y_test2" was set but never used [set_but_not_used]
    double x_test1,y_test1,z_test1,x_test2,y_test2,z_test2,dist;	// intersection with the elliptical surface
                                           ^

"./SAXS_saxlab.c", line 11257: warning: variable "dist" was declared but never referenced [declared_but_not_referenced]
    double x_test1,y_test1,z_test1,x_test2,y_test2,z_test2,dist;	// intersection with the elliptical surface
                                                           ^

"./SAXS_saxlab.c", line 11487: warning: variable "k" was declared but never referenced [declared_but_not_referenced]
      int i,j,k;
              ^

"./SAXS_saxlab.c", line 11488: warning: variable "e" was declared but never referenced [declared_but_not_referenced]
      double e,p2;
             ^

"./SAXS_saxlab.c", line 12936: warning: variable "j" was declared but never referenced [declared_but_not_referenced]
    int i,j,N=10;
          ^

"./SAXS_saxlab.c", line 12936: warning: variable "N" was declared but never referenced [declared_but_not_referenced]
    int i,j,N=10;
            ^

"./SAXS_saxlab.c", line 13334: warning: variable "t" was declared but never referenced [declared_but_not_referenced]
    time_t  t;
            ^

"./SAXS_saxlab.c", line 13335: warning: variable "ct" was set but never used [set_but_not_used]
    clock_t ct;
            ^

"./SAXS_saxlab.c", line 1498: warning: variable "mcstartdate" was set but never used [set_but_not_used]
  static   long mcstartdate            = 0; /* start simulation time */
                ^

"./SAXS_saxlab.c", line 2918: warning: function "strcpy_valid" was declared but never referenced [declared_but_not_referenced]
  static char *strcpy_valid(char *valid, char *original)
               ^

mcgenstate:
     98, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getvar:
    112, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getvar_void:
    145, Generating acc routine seq
         Generating NVIDIA GPU code
particle_setvar_void:
    170, Generating acc routine seq
         Generating NVIDIA GPU code
particle_setvar_void_array:
    193, Generating acc routine seq
         Generating NVIDIA GPU code
particle_restore:
    204, Generating acc routine seq
         Generating NVIDIA GPU code
particle_getuservar_byid:
    213, Generating acc routine seq
         Generating NVIDIA GPU code
particle_uservar_init:
    223, Generating acc routine seq
         Generating NVIDIA GPU code
noprintf:
   1546, Generating acc routine seq
         Generating NVIDIA GPU code
str_comp:
   1550, Generating acc routine seq
         Generating NVIDIA GPU code
str_len:
   1559, Generating acc routine seq
         Generating NVIDIA GPU code
mcget_ncount:
   4182, Generating acc routine seq
         Generating NVIDIA GPU code
coords_set:
   4613, Generating acc routine seq
         Generating NVIDIA GPU code
coords_get:
   4624, Generating acc routine seq
         Generating NVIDIA GPU code
coords_add:
   4633, Generating acc routine seq
         Generating NVIDIA GPU code
coords_sub:
   4645, Generating acc routine seq
         Generating NVIDIA GPU code
coords_neg:
   4657, Generating acc routine seq
         Generating NVIDIA GPU code
coords_scale:
   4667, Generating acc routine seq
         Generating NVIDIA GPU code
coords_sp:
   4677, Generating acc routine seq
         Generating NVIDIA GPU code
coords_xp:
   4685, Generating acc routine seq
         Generating NVIDIA GPU code
coords_len:
   4695, Generating acc routine seq
         Generating NVIDIA GPU code
coords_print:
   4717, Generating acc routine seq
         Generating NVIDIA GPU code
coords_norm:
   4724, Generating acc routine seq
         Generating NVIDIA GPU code
rot_set_rotation:
   4770, Generating acc routine seq
         Generating NVIDIA GPU code
rot_test_identity:
   4805, Generating acc routine seq
         Generating NVIDIA GPU code
rot_mul:
   4816, Generating acc routine seq
         Generating NVIDIA GPU code
rot_copy:
   4833, Generating acc routine seq
         Generating NVIDIA GPU code
rot_transpose:
   4844, Generating acc routine seq
         Generating NVIDIA GPU code
rot_apply:
   4860, Generating acc routine seq
         Generating NVIDIA GPU code
vec_prod_func:
   4889, Generating acc routine seq
         Generating NVIDIA GPU code
scalar_prod:
   4900, Generating acc routine seq
         Generating NVIDIA GPU code
norm_func:
   4904, Generating acc routine seq
         Generating NVIDIA GPU code
mccoordschange:
   5081, Generating acc routine seq
         Generating NVIDIA GPU code
mccoordschange_polarisation:
   5112, Generating acc routine seq
         Generating NVIDIA GPU code
normal_vec:
   5129, Generating acc routine seq
         Generating NVIDIA GPU code
solve_2nd_order:
   5228, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_circle:
   5312, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_rect_angular:
   5378, Generating acc routine seq
         Generating NVIDIA GPU code
_randvec_target_rect_real:
   5455, Generating acc routine seq
         Generating NVIDIA GPU code
kiss_srandom:
   5727, Generating acc routine seq
         Generating NVIDIA GPU code
kiss_random:
   5739, Generating acc routine seq
         Generating NVIDIA GPU code
_hash:
   5771, Generating acc routine seq
         Generating NVIDIA GPU code
_randnorm2:
   5812, Generating acc routine seq
         Generating NVIDIA GPU code
_randtriangle:
   5823, Generating acc routine seq
         Generating NVIDIA GPU code
_rand01:
   5828, Generating acc routine seq
         Generating NVIDIA GPU code
_randpm1:
   5836, Generating acc routine seq
         Generating NVIDIA GPU code
_rand0max:
   5844, Generating acc routine seq
         Generating NVIDIA GPU code
_randminmax:
   5851, Generating acc routine seq
         Generating NVIDIA GPU code
mcsetstate:
   6514, Generating acc routine seq
         Generating NVIDIA GPU code
mcgetstate:
   6547, Generating acc routine seq
         Generating NVIDIA GPU code
inside_rectangle:
   6608, Generating acc routine seq
         Generating NVIDIA GPU code
box_intersect:
   6624, Generating acc routine seq
         Generating NVIDIA GPU code
cylinder_intersect:
   6710, Generating acc routine seq
         Generating NVIDIA GPU code
sphere_intersect:
   6778, Generating acc routine seq
         Generating NVIDIA GPU code
ellipsoid_intersect:
   6804, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
Table_Index:
   7948, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Value:
   8016, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Value2d:
   8095, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp1d:
   8563, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp1d_nearest:
   8579, Generating acc routine seq
         Generating NVIDIA GPU code
Table_Interp2d:
   8597, Generating acc routine seq
         Generating NVIDIA GPU code
CoordTransME:
   8624, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
CoordTransEM:
   8632, Generating implicit acc routine seq
         Generating acc routine seq
         Generating NVIDIA GPU code
init:
  10776, Generating update device(_Origin_var,_detector_var,_mirror_var,_mirrorexit_var,_psdin3_var,_ymirrorrot_var,_xmirrorrot_var,_instrument_var,_mirrormnt_var,_mirrorentryslit_var,_mirrorout_var,_pinhole3_var,_pinhole1_var,_psd1_var,_psdin1_var,_pinhole2_var,_psdin2_var,_Source_var,_energy_BEF_var)
class_Progress_bar_trace:
  10817, Generating acc routine seq
         Generating NVIDIA GPU code
class_Source_gaussian_trace:
  10908, Generating acc routine seq
         Generating NVIDIA GPU code
class_E_monitor_trace:
  11085, Generating acc routine seq
         Generating NVIDIA GPU code
class_Slit_trace:
  11160, Generating acc routine seq
         Generating NVIDIA GPU code
class_TwinKB_ML_trace:
  11230, Generating acc routine seq
         Generating NVIDIA GPU code
class_PSD_monitor_trace:
  11467, Generating acc routine seq
         Generating NVIDIA GPU code
raytrace:
  11562, Generating acc routine seq
         Generating NVIDIA GPU code
raytrace_all:
  11935, Generating implicit firstprivate(gpu_innerloop)
         Generating NVIDIA GPU code
      11949, #pragma acc loop gang(numgangs), vector(vecsize) /* blockIdx.x threadIdx.x */
  11935, Local memory used for .inl_particle_15640,particleN,.inl_.inl_mcphoton_0_15656,.inl_.X1917_15658,.inl_.inl_.X2115_13_15657
  11949, Generating implicit firstprivate(seed,_particle)
finally:
  12660, Generating update self(_Origin_var,_detector_var,_mirror_var,_mirrorexit_var,_psdin3_var,_xmirrorrot_var,_ymirrorrot_var,_instrument_var,_mirrormnt_var,_mirrorentryslit_var,_mirrorout_var,_pinhole3_var,_pinhole1_var,_psd1_var,_psdin1_var,_pinhole2_var,_psdin2_var,_Source_var,_energy_BEF_var)
mcenabletrace:
   5971, Generating update device(mcdotrace)
DEBUG: CMD: nvc finished
INFO: ===