loading system configuration loading override configuration from /home/nexmap/pkwi/mxtest/mctest/../mccodelib/mcxtrace-test/McXtrace-1.x_CPU_MPICC/mccode_config.json INFO: Using directory: "1" INFO: Using existing c-file: ./SOLEIL_ANATOMIX.c INFO: Using existing binary: ./SOLEIL_ANATOMIX.out INFO: === Simulation 'SOLEIL_ANATOMIX' (/home/nexmap/pkwi/xTESTS/2023-12-20/McXtrace-1.x_CPU_MPICC_5e7/SOLEIL_ANATOMIX/SOLEIL_ANATOMIX.instr): running on 16 nodes (master is 'elearn1.fysik.dtu.dk', MPI version 3.1). SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] [SOLEIL_ANATOMIX] Initialize SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize Monitor_nD: e_repartition_before_cc is using automatic limits option 'auto' together with MPI. WARNING this may create incorrect distributions (but integrated flux will be right). Opening input file '/home/nexmap/pkwi/McXtrace/mcxtrace/1.x-dev/tools/Python/mxrun/../mccodelib/../../../data/Si.txt' (Table_Read_Offset) Opening input file '/home/nexmap/pkwi/McXtrace/mcxtrace/1.x-dev/tools/Python/mxrun/../mccodelib/../../../data/FormFactors.txt' (Table_Read_Offset) Loading geometry file (OFF/PLY): wire.ply Number of vertices: 2584 Number of polygons: 5438 Bounding box dimensions for geometry wire.ply: Length=0.020000 (11.530%) Width= 0.008997 (11.530%) Depth= 0.016806 (11.530%) Opening input file '/home/nexmap/pkwi/McXtrace/mcxtrace/1.x-dev/tools/Python/mxrun/../mccodelib/../../../data/Ge.txt' (Table_Read_Offset) WARNING: (Table_Rebin): Rebinning table from Ge.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Ge.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Ge.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Ge.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Ge.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Ge.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Ge.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Ge.txt would exceed 1M rows. Skipping. sample: Rebinning material data (Ge.txt) for faster tracing...done sample: Rebinning material data (Ge.txt) for faster tracing...done sample: Rebinning material data (Ge.txt) for faster tracing...done sample: Rebinning material data (Ge.txt) for faster tracing...done sample: Rebinning material data (Ge.txt) for faster tracing...done sample: Rebinning material data (Ge.txt) for faster tracing...done sample: Rebinning material data (Ge.txt) for faster tracing...done sample: Rebinning material data (Ge.txt) for faster tracing...done sample: Rebinning material data (Ge.txt) for faster tracing...done sample: Rebinning material data (Ge.txt) for faster tracing...done sample: Rebinning material data (Ge.txt) for faster tracing...done sample: Rebinning material data (Ge.txt) for faster tracing...done sample: Rebinning material data (Ge.txt) for faster tracing...done sample: Rebinning material data (Ge.txt) for faster tracing...done sample: Rebinning material data (Ge.txt) for faster tracing...done WARNING: (Table_Rebin): Rebinning table from Ge.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Ge.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Ge.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Ge.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Ge.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Ge.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Ge.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Ge.txt would exceed 1M rows. Skipping. sample: Rebinning material data (Ge.txt) for faster tracing...done Trace ETA 7.95 [min] % 2 Trace ETA 7.95 [min] % 2 Trace ETA 7.95 [min] % 2 Trace ETA 7.95 [min] % 2 Trace ETA 7.83333 [min] % 2 Trace ETA 7.95 [min] % 2 Trace ETA 7.95 [min] % 2 Trace ETA 7.95 [min] % 2 Trace ETA 7.95 [min] % 2 Trace ETA 7.83333 [min] % 2 Trace ETA 7.95 [min] % 2 Trace ETA 7.95 [min] % 2 Trace ETA 7.73333 [min] % 2 Trace ETA 7.95 [min] % 2 Trace ETA 7.73333 [min] % 2 Trace ETA 7.73333 [min] % 2 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 22 22 22 22 22 22 22 22 22 22 22 22 22 22 22 22 32 32 32 32 32 32 32 32 32 32 32 32 32 32 32 32 42 42 42 42 42 42 42 42 42 42 42 42 42 42 42 42 52 52 52 52 52 52 52 52 52 52 52 52 52 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 72 72 72 72 72 72 72 72 72 72 72 72 72 72 72 72 82 82 82 82 82 82 82 82 82 82 82 82 82 82 82 82 92 92 92 92 92 92 92 92 92 92 92 92 92 92 92 92 Finally [SOLEIL_ANATOMIX: 1]. Time: 7.3 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.3 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.31667 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.35 [min] Save [SOLEIL_ANATOMIX] Detector: e_repartition_before_cc_I=1.77531e+22 e_repartition_before_cc_ERR=2.14039e+19 e_repartition_before_cc_N=4.98829e+07 "e_repartition_before_cc.E_y" Detector: psd_monitor_before_cc_I=1.77741e+22 psd_monitor_before_cc_ERR=2.14158e+19 psd_monitor_before_cc_N=4.99461e+07 "psd_monitor_before_cc.dat" Finally [SOLEIL_ANATOMIX: 1]. Time: 7.35 [min] Detector: psd_after_cc_I=3.68659e+18 psd_after_cc_ERR=2.14293e+16 psd_after_cc_N=5e+07 "psd_after_cc2.dat" Finally [SOLEIL_ANATOMIX: 1]. Time: 7.35 [min] Detector: e_monitor_before_sample_I=3.68659e+18 e_monitor_before_sample_ERR=2.14293e+16 e_monitor_before_sample_N=5e+07 "e_monitor_before_sample.dat" Detector: psd_repartition_after_cc_I=3.68659e+18 psd_repartition_after_cc_ERR=2.14293e+16 psd_repartition_after_cc_N=5e+07 "psd_repartition_after_cc.dat" Detector: e_monitor_after_sample_I=1.57485e+18 e_monitor_after_sample_ERR=1.38242e+16 e_monitor_after_sample_N=5e+07 "e_monitor_after_sample.dat" Finally [SOLEIL_ANATOMIX: 1]. Time: 7.35 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.35 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.35 [min] Detector: psd_monitor_after_cc_I=1.19139e+18 psd_monitor_after_cc_ERR=1.19813e+16 psd_monitor_after_cc_N=4.49252e+07 "psd_monitor_after_sample.dat" Finally [SOLEIL_ANATOMIX: 1]. Time: 7.35 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.35 [min] INFO: Placing instr file copy /home/nexmap/pkwi/xTESTS/2023-12-20/McXtrace-1.x_CPU_MPICC_5e7/SOLEIL_ANATOMIX/SOLEIL_ANATOMIX.instr in dataset 1