INFO: Using directory: "1" INFO: Using existing c-file: ./NSLS2_CHX.c INFO: Using existing binary: ./NSLS2_CHX.out WARNING: Ignoring invalid parameter: "NSLS2_CHX" INFO: === Simulation 'NSLS2_CHX' (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr): running on 16 nodes (master is 'elearn1.fysik.dtu.dk', MPI version 3.1). [NSLS2_CHX] Initialize [NSLS2_CHX] Initialize [NSLS2_CHX] Initialize [NSLS2_CHX] Initialize [NSLS2_CHX] Initialize [NSLS2_CHX] Initialize [NSLS2_CHX] Initialize [NSLS2_CHX] Initialize [NSLS2_CHX] Initialize [NSLS2_CHX] Initialize [NSLS2_CHX] Initialize [NSLS2_CHX] Initialize [NSLS2_CHX] Initialize [NSLS2_CHX] Initialize [NSLS2_CHX] Initialize [NSLS2_CHX] Initialize Opening input file '/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/data/Be.txt' (Table_Read_Offset) Reusing input file 'Be.txt' (Table_Read_Offset) *** stack smashing detected ***: terminated # McXtrace 3.x-dev - Jul. 01, 2024: [pid 1504241] Signal 6 detected [proc 6] SIGABRT (Abort) # Simulation: NSLS2_CHX (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr) # Breakpoint: [_CRL_trace] component CRL=Lens_parab_Cyl() TRACE [/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/optics/Lens_parab_Cyl.comp:203] 0.00 % ( 0.0/ 3125000.0) # Date: Mon Jul 1 11:17:19 2024 # Started: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: Simulation stop (abort). *** stack smashing detected ***: terminated *** stack smashing detected ***: terminated # Last I/O Error: No such file or directory *** stack smashing detected ***: terminated *** stack smashing detected ***: terminated # McXtrace 3.x-dev - Jul. 01, 2024: [pid 1504240] Signal 6 detected [proc 5] SIGABRT (Abort) # Simulation: NSLS2_CHX (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr) # Breakpoint: [_CRL_trace] component CRL=Lens_parab_Cyl() TRACE [/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/optics/Lens_parab_Cyl.comp:203] 0.00 % ( 0.0/ 3125000.0) # McXtrace 3.x-dev - Jul. 01, 2024: [pid 1504237] Signal 6 detected [proc 2] SIGABRT (Abort) # Simulation: NSLS2_CHX (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr) # Breakpoint: [_CRL_trace] component CRL=Lens_parab_Cyl() TRACE [/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/optics/Lens_parab_Cyl.comp:203] 0.00 % ( 0.0/ 3125000.0) # Date: Mon Jul 1 11:17:19 2024 # Started: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: [pid 1504238] Signal 6 detected [proc 3] SIGABRT (Abort) # Simulation: NSLS2_CHX (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr) # Breakpoint: [_CRL_trace] component CRL=Lens_parab_Cyl() TRACE [/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/optics/Lens_parab_Cyl.comp:203] 0.00 % ( 0.0/ 3125000.0) *** stack smashing detected ***: terminated *** stack smashing detected ***: terminated # Last I/O Error: No such file or directory *** stack smashing detected ***: terminated *** stack smashing detected ***: terminated # Last I/O Error: No such file or directory # Last I/O Error: No such file or directory *** stack smashing detected ***: terminated # Date: Mon Jul 1 11:17:19 2024 # Started: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: Simulation stop (abort). # McXtrace 3.x-dev - Jul. 01, 2024: [pid 1504235] Signal 6 detected [proc 0] SIGABRT (Abort) # Simulation: NSLS2_CHX (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr) # Breakpoint: [_CRL_trace] component CRL=Lens_parab_Cyl() TRACE [/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/optics/Lens_parab_Cyl.comp:203] 0.00 % ( 0.0/ 3125000.0) # Date: Mon Jul 1 11:17:19 2024 # Started: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: Simulation stop (abort). # McXtrace 3.x-dev - Jul. 01, 2024: Simulation stop (abort). # McXtrace 3.x-dev - Jul. 01, 2024: [pid 1504257] Signal 6 detected [proc 12] SIGABRT (Abort) # Simulation: NSLS2_CHX (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr) # Breakpoint: [_CRL_trace] component CRL=Lens_parab_Cyl() TRACE [/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/optics/Lens_parab_Cyl.comp:203] 0.00 % ( 0.0/ 3125000.0) # Date: Mon Jul 1 11:17:19 2024 # Started: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: Simulation stop (abort). # McXtrace 3.x-dev - Jul. 01, 2024: [pid 1504265] Signal 6 detected [proc 14] SIGABRT (Abort) # Simulation: NSLS2_CHX (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr) # Breakpoint: [_CRL_trace] component CRL=Lens_parab_Cyl() TRACE [/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/optics/Lens_parab_Cyl.comp:203] 0.00 % ( 0.0/ 3125000.0) # Date: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: [pid 1504246] Signal 6 detected [proc 9] SIGABRT (Abort) # Simulation: NSLS2_CHX (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr) # Breakpoint: [_CRL_trace] component CRL=Lens_parab_Cyl() TRACE [/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/optics/Lens_parab_Cyl.comp:203] 0.00 % ( 0.0/ 3125000.0) # Date: Mon Jul 1 11:17:19 2024 # Started: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: Simulation stop (abort). # Last I/O Error: No such file or directory # Last I/O Error: No such file or directory *** stack smashing detected ***: terminated # Last I/O Error: No such file or directory *** stack smashing detected ***: terminated # Last I/O Error: No such file or directory *** stack smashing detected ***: terminated # Last I/O Error: No such file or directory # Last I/O Error: No such file or directory # Last I/O Error: No such file or directory *** stack smashing detected ***: terminated # Last I/O Error: No such file or directory # McXtrace 3.x-dev - Jul. 01, 2024: [pid 1504260] Signal 6 detected [proc 13] SIGABRT (Abort) # Simulation: NSLS2_CHX (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr) # Breakpoint: [_CRL_trace] component CRL=Lens_parab_Cyl() TRACE [/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/optics/Lens_parab_Cyl.comp:203] 0.00 % ( 0.0/ 3125000.0) # Started: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: Simulation stop (abort). # Date: Mon Jul 1 11:17:19 2024 # Started: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: Simulation stop (abort). # McXtrace 3.x-dev - Jul. 01, 2024: [pid 1504267] Signal 6 detected [proc 15] SIGABRT (Abort) # Simulation: NSLS2_CHX (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr) # Breakpoint: [_CRL_trace] component CRL=Lens_parab_Cyl() TRACE [/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/optics/Lens_parab_Cyl.comp:203] 0.00 % ( 0.0/ 3125000.0) # Date: Mon Jul 1 11:17:19 2024 # Started: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: [pid 1504236] Signal 6 detected [proc 1] SIGABRT (Abort) # Simulation: NSLS2_CHX (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr) # Breakpoint: [_CRL_trace] component CRL=Lens_parab_Cyl() TRACE [/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/optics/Lens_parab_Cyl.comp:203] 0.00 % ( 0.0/ 3125000.0) # Date: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: [pid 1504239] Signal 6 detected [proc 4] SIGABRT (Abort) # Simulation: NSLS2_CHX (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr) # Breakpoint: [_CRL_trace] component CRL=Lens_parab_Cyl() TRACE [/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/optics/Lens_parab_Cyl.comp:203] 0.00 % ( 0.0/ 3125000.0) # Date: Mon Jul 1 11:17:19 2024 # Started: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: Simulation stop (abort). # Date: Mon Jul 1 11:17:19 2024 # Started: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: Simulation stop (abort). *** stack smashing detected ***: terminated # Last I/O Error: No such file or directory # Last I/O Error: No such file or directory # McXtrace 3.x-dev - Jul. 01, 2024: Simulation stop (abort). # Started: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: Simulation stop (abort). # McXtrace 3.x-dev - Jul. 01, 2024: [pid 1504244] Signal 6 detected [proc 8] SIGABRT (Abort) # Simulation: NSLS2_CHX (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr) # Breakpoint: [_CRL_trace] component CRL=Lens_parab_Cyl() TRACE [/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/optics/Lens_parab_Cyl.comp:203] 0.00 % ( 0.0/ 3125000.0) # McXtrace 3.x-dev - Jul. 01, 2024: [pid 1504250] Signal 6 detected [proc 10] SIGABRT (Abort) # Simulation: NSLS2_CHX (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr) # Breakpoint: [_CRL_trace] component CRL=Lens_parab_Cyl() TRACE [/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/optics/Lens_parab_Cyl.comp:203] 0.00 % ( 0.0/ 3125000.0) # Date: Mon Jul 1 11:17:19 2024 # Started: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: Simulation stop (abort). # Date: Mon Jul 1 11:17:19 2024 # Started: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: Simulation stop (abort). # McXtrace 3.x-dev - Jul. 01, 2024: [pid 1504242] Signal 6 detected [proc 7] SIGABRT (Abort) # Simulation: NSLS2_CHX (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr) # Breakpoint: [_CRL_trace] component CRL=Lens_parab_Cyl() TRACE [/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/optics/Lens_parab_Cyl.comp:203] 0.00 % ( 0.0/ 3125000.0) # Date: Mon Jul 1 11:17:19 2024 # Started: Mon Jul 1 11:17:19 2024 # Last I/O Error: No such file or directory *** stack smashing detected ***: terminated # McXtrace 3.x-dev - Jul. 01, 2024: Simulation stop (abort). # McXtrace 3.x-dev - Jul. 01, 2024: [pid 1504253] Signal 6 detected [proc 11] SIGABRT (Abort) # Simulation: NSLS2_CHX (/home/nexmap/pkwi/xTESTS/2024-07-01/mcxtrace-3.x-dev_Linux/NSLS2_CHX/NSLS2_CHX.instr) # Breakpoint: [_CRL_trace] component CRL=Lens_parab_Cyl() TRACE [/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/optics/Lens_parab_Cyl.comp:203] 0.00 % ( 0.0/ 3125000.0) # Date: Mon Jul 1 11:17:19 2024 # Started: Mon Jul 1 11:17:19 2024 # McXtrace 3.x-dev - Jul. 01, 2024: Simulation stop (abort). # Last I/O Error: No such file or directory -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- mpirun noticed that process rank 14 with PID 0 on node elearn1 exited on signal 3 (Quit). -------------------------------------------------------------------------- INFO: call to mpirun failed with Command 'mpirun -np 16 ./NSLS2_CHX.out --trace=0 --seed=1000 --ncount=50000000.0 --dir=1 --format=McCode L=33.5 L2=35.3 L3=44 Energy=10' returned non-zero exit status 131. Traceback (most recent call last): File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/mxrun.py", line 569, in main() File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/mxrun.py", line 547, in main mcstas.run() # in mccode.py File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/mccode.py", line 329, in run return self.runMPI(args, pipe, override_mpi) File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/mccode.py", line 370, in runMPI return Process(binpath).run(args, pipe=pipe) File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/mccode.py", line 77, in run raise err File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/mccode.py", line 73, in run proc = run(command, shell=True, check=True, text=True, capture_output=pipe) File "/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib/python3.10/subprocess.py", line 526, in run raise CalledProcessError(retcode, process.args, subprocess.CalledProcessError: Command 'mpirun -np 16 ./NSLS2_CHX.out --trace=0 --seed=1000 --ncount=50000000.0 --dir=1 --format=McCode L=33.5 L2=35.3 L3=44 Energy=10' returned non-zero exit status 131.