INFO: No output directory specified (--dir) INFO: Using directory: "SAXS_saxlab_20240701_130127" INFO: Regenerating c-file: SAXS_saxlab.c DEBUG: CMD: /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/bin/mcxtrace -t -o ./SAXS_saxlab.c /home/nexmap/pkwi/xTESTS/2024-07-01/McXtrace_8GPU_Linux_5e6/SAXS_saxlab/SAXS_saxlab.instr CFLAGS= ----------------------------------------------------------- Generating single GPU kernel or single CPU section layout: ----------------------------------------------------------- Generating GPU/CPU -DFUNNEL layout: ----------------------------------------------------------- DEBUG: CMD: /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/bin/mcxtrace finished INFO: Recompiling: ./SAXS_saxlab.out DEBUG: CMD: nvc -o ./SAXS_saxlab.out ./SAXS_saxlab.c -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -Wl,-rpath-link,/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -L/u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/lib -mtune=haswell -fPIC -O2 -isystem /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/miniconda3/include -fast -Minfo=accel -acc=gpu -gpu=managed -DOPENACC "./SAXS_saxlab.c", line 4258: warning: variable "num" was declared but never referenced [declared_but_not_referenced] int num = 3; ^ Remark: individual warnings can be suppressed with "--diag_suppress " "./SAXS_saxlab.c", line 6373: warning: variable "ret" was declared but never referenced [declared_but_not_referenced] int ret=1,stat=0,plane_stat=0; ^ "./SAXS_saxlab.c", line 6546: warning: variable "D" was declared but never referenced [declared_but_not_referenced] double A,B,C,D,k; ^ "./SAXS_saxlab.c", line 8643: warning: variable "tc2" was set but never used [set_but_not_used] Coords tc1, tc2; ^ "./SAXS_saxlab.c", line 8631: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 1; ^ "./SAXS_saxlab.c", line 8673: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 2; ^ "./SAXS_saxlab.c", line 8733: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 3; ^ "./SAXS_saxlab.c", line 8783: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 4; ^ "./SAXS_saxlab.c", line 8834: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 5; ^ "./SAXS_saxlab.c", line 8872: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 6; ^ "./SAXS_saxlab.c", line 8910: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 7; ^ "./SAXS_saxlab.c", line 8948: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 8; ^ "./SAXS_saxlab.c", line 8998: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 9; ^ "./SAXS_saxlab.c", line 9036: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 10; ^ "./SAXS_saxlab.c", line 9087: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 11; ^ "./SAXS_saxlab.c", line 9138: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 12; ^ "./SAXS_saxlab.c", line 9190: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 13; ^ "./SAXS_saxlab.c", line 9241: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 14; ^ "./SAXS_saxlab.c", line 9293: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 15; ^ "./SAXS_saxlab.c", line 9345: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 16; ^ "./SAXS_saxlab.c", line 9396: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 17; ^ "./SAXS_saxlab.c", line 9448: warning: variable "current_setpos_index" was declared but never referenced [declared_but_not_referenced] int current_setpos_index = 18; ^ "./SAXS_saxlab.c", line 9585: warning: variable "status" was set but never used [set_but_not_used] int status=0; ^ "./SAXS_saxlab.c", line 9712: warning: variable "i" was declared but never referenced [declared_but_not_referenced] int i; ^ "./SAXS_saxlab.c", line 9835: warning: variable "status" was set but never used [set_but_not_used] int status=0; ^ "./SAXS_saxlab.c", line 9883: warning: variable "i" was declared but never referenced [declared_but_not_referenced] int i,j; ^ "./SAXS_saxlab.c", line 9883: warning: variable "j" was declared but never referenced [declared_but_not_referenced] int i,j; ^ "./SAXS_saxlab.c", line 9884: warning: variable "p1" was declared but never referenced [declared_but_not_referenced] double *p1,*p2,*p3; ^ "./SAXS_saxlab.c", line 9884: warning: variable "p2" was declared but never referenced [declared_but_not_referenced] double *p1,*p2,*p3; ^ "./SAXS_saxlab.c", line 9884: warning: variable "p3" was declared but never referenced [declared_but_not_referenced] double *p1,*p2,*p3; ^ "./SAXS_saxlab.c", line 10215: warning: variable "z1" was set but never used [set_but_not_used] double xx,yy,x1,y1,z1; ^ "./SAXS_saxlab.c", line 10217: warning: variable "F1" was declared but never referenced [declared_but_not_referenced] double F1=1.0; ^ "./SAXS_saxlab.c", line 10712: warning: variable "dSingle" was set but never used [set_but_not_used] double dSingle,lambda; // dSingle - thickness of one layer of the multilayer, AA ^ "./SAXS_saxlab.c", line 10553: warning: variable "A" was declared but never referenced [declared_but_not_referenced] double A,B,C,D,l01,l11,l02,l12; ^ "./SAXS_saxlab.c", line 10553: warning: variable "B" was declared but never referenced [declared_but_not_referenced] double A,B,C,D,l01,l11,l02,l12; ^ "./SAXS_saxlab.c", line 10553: warning: variable "C" was declared but never referenced [declared_but_not_referenced] double A,B,C,D,l01,l11,l02,l12; ^ "./SAXS_saxlab.c", line 10553: warning: variable "D" was declared but never referenced [declared_but_not_referenced] double A,B,C,D,l01,l11,l02,l12; ^ "./SAXS_saxlab.c", line 10554: warning: variable "x_test1" was set but never used [set_but_not_used] double x_test1,y_test1,z_test1,x_test2,y_test2,z_test2,dist; // intersection with the elliptical surface ^ "./SAXS_saxlab.c", line 10554: warning: variable "y_test2" was set but never used [set_but_not_used] double x_test1,y_test1,z_test1,x_test2,y_test2,z_test2,dist; // intersection with the elliptical surface ^ "./SAXS_saxlab.c", line 10554: warning: variable "dist" was declared but never referenced [declared_but_not_referenced] double x_test1,y_test1,z_test1,x_test2,y_test2,z_test2,dist; // intersection with the elliptical surface ^ "./SAXS_saxlab.c", line 10791: warning: variable "k" was declared but never referenced [declared_but_not_referenced] int i,j,k; ^ "./SAXS_saxlab.c", line 10792: warning: variable "e" was declared but never referenced [declared_but_not_referenced] double e,p2; ^ "./SAXS_saxlab.c", line 12214: warning: variable "j" was declared but never referenced [declared_but_not_referenced] int i,j,N=10; ^ "./SAXS_saxlab.c", line 12214: warning: variable "N" was declared but never referenced [declared_but_not_referenced] int i,j,N=10; ^ "./SAXS_saxlab.c", line 12609: warning: variable "t" was declared but never referenced [declared_but_not_referenced] time_t t; ^ "./SAXS_saxlab.c", line 12610: warning: variable "ct" was set but never used [set_but_not_used] clock_t ct; ^ "./SAXS_saxlab.c", line 1480: warning: variable "mcstartdate" was set but never used [set_but_not_used] static long mcstartdate = 0; /* start simulation time */ ^ "./SAXS_saxlab.c", line 2872: warning: function "strcpy_valid" was declared but never referenced [declared_but_not_referenced] static char *strcpy_valid(char *valid, char *original) ^ mcgenstate: 81, Generating acc routine seq Generating NVIDIA GPU code particle_getvar: 95, Generating acc routine seq Generating NVIDIA GPU code particle_getvar_void: 128, Generating acc routine seq Generating NVIDIA GPU code particle_setvar_void: 153, Generating acc routine seq Generating NVIDIA GPU code particle_setvar_void_array: 176, Generating acc routine seq Generating NVIDIA GPU code particle_restore: 187, Generating acc routine seq Generating NVIDIA GPU code particle_getuservar_byid: 196, Generating acc routine seq Generating NVIDIA GPU code particle_uservar_init: 206, Generating acc routine seq Generating NVIDIA GPU code noprintf: 1520, Generating acc routine seq Generating NVIDIA GPU code str_comp: 1524, Generating acc routine seq Generating NVIDIA GPU code str_len: 1533, Generating acc routine seq Generating NVIDIA GPU code mcget_ncount: 3880, Generating acc routine seq Generating NVIDIA GPU code coords_set: 4310, Generating acc routine seq Generating NVIDIA GPU code coords_get: 4321, Generating acc routine seq Generating NVIDIA GPU code coords_add: 4330, Generating acc routine seq Generating NVIDIA GPU code coords_sub: 4342, Generating acc routine seq Generating NVIDIA GPU code coords_neg: 4354, Generating acc routine seq Generating NVIDIA GPU code coords_scale: 4364, Generating acc routine seq Generating NVIDIA GPU code coords_sp: 4374, Generating acc routine seq Generating NVIDIA GPU code coords_xp: 4382, Generating acc routine seq Generating NVIDIA GPU code coords_len: 4392, Generating acc routine seq Generating NVIDIA GPU code coords_print: 4414, Generating acc routine seq Generating NVIDIA GPU code coords_norm: 4421, Generating acc routine seq Generating NVIDIA GPU code rot_set_rotation: 4467, Generating acc routine seq Generating NVIDIA GPU code rot_test_identity: 4502, Generating acc routine seq Generating NVIDIA GPU code rot_mul: 4513, Generating acc routine seq Generating NVIDIA GPU code rot_copy: 4530, Generating acc routine seq Generating NVIDIA GPU code rot_transpose: 4541, Generating acc routine seq Generating NVIDIA GPU code rot_apply: 4557, Generating acc routine seq Generating NVIDIA GPU code vec_prod_func: 4586, Generating acc routine seq Generating NVIDIA GPU code scalar_prod: 4597, Generating acc routine seq Generating NVIDIA GPU code norm_func: 4601, Generating acc routine seq Generating NVIDIA GPU code mccoordschange: 4778, Generating acc routine seq Generating NVIDIA GPU code mccoordschange_polarisation: 4809, Generating acc routine seq Generating NVIDIA GPU code normal_vec: 4826, Generating acc routine seq Generating NVIDIA GPU code solve_2nd_order: 4925, Generating acc routine seq Generating NVIDIA GPU code _randvec_target_circle: 5009, Generating acc routine seq Generating NVIDIA GPU code _randvec_target_rect_angular: 5075, Generating acc routine seq Generating NVIDIA GPU code _randvec_target_rect_real: 5152, Generating acc routine seq Generating NVIDIA GPU code kiss_srandom: 5424, Generating acc routine seq Generating NVIDIA GPU code kiss_random: 5434, Generating acc routine seq Generating NVIDIA GPU code _hash: 5460, Generating acc routine seq Generating NVIDIA GPU code _randnorm2: 5501, Generating acc routine seq Generating NVIDIA GPU code _randtriangle: 5512, Generating acc routine seq Generating NVIDIA GPU code _rand01: 5517, Generating acc routine seq Generating NVIDIA GPU code _randpm1: 5525, Generating acc routine seq Generating NVIDIA GPU code _rand0max: 5533, Generating acc routine seq Generating NVIDIA GPU code _randminmax: 5540, Generating acc routine seq Generating NVIDIA GPU code mcsetstate: 6174, Generating acc routine seq Generating NVIDIA GPU code mcgetstate: 6207, Generating acc routine seq Generating NVIDIA GPU code inside_rectangle: 6268, Generating acc routine seq Generating NVIDIA GPU code box_intersect: 6284, Generating acc routine seq Generating NVIDIA GPU code cylinder_intersect: 6370, Generating acc routine seq Generating NVIDIA GPU code sphere_intersect: 6438, Generating acc routine seq Generating NVIDIA GPU code ellipsoid_intersect: 6464, Generating implicit acc routine seq Generating acc routine seq Generating NVIDIA GPU code Table_Index: 7583, Generating acc routine seq Generating NVIDIA GPU code Table_Value: 7651, Generating acc routine seq Generating NVIDIA GPU code Table_Value2d: 7730, Generating acc routine seq Generating NVIDIA GPU code Table_Interp1d: 8168, Generating acc routine seq Generating NVIDIA GPU code Table_Interp1d_nearest: 8184, Generating acc routine seq Generating NVIDIA GPU code Table_Interp2d: 8202, Generating acc routine seq Generating NVIDIA GPU code CoordTransME: 8228, Generating implicit acc routine seq Generating acc routine seq Generating NVIDIA GPU code CoordTransEM: 8236, Generating implicit acc routine seq Generating acc routine seq Generating NVIDIA GPU code init: 10043, Generating update device(_Origin_var,_detector_var,_mirror_var,_mirrorexit_var,_psdin3_var,_ymirrorrot_var,_xmirrorrot_var,_instrument_var,_mirrormnt_var,_mirrorentryslit_var,_mirrorout_var,_pinhole3_var,_pinhole1_var,_psd1_var,_psdin1_var,_pinhole2_var,_psdin2_var,_Source_var,_energy_BEF_var) class_Progress_bar_trace: 10086, Generating acc routine seq Generating NVIDIA GPU code class_Source_gaussian_trace: 10184, Generating acc routine seq Generating NVIDIA GPU code class_E_monitor_trace: 10368, Generating acc routine seq Generating NVIDIA GPU code class_Slit_trace: 10450, Generating acc routine seq Generating NVIDIA GPU code class_TwinKB_ML_trace: 10527, Generating acc routine seq Generating NVIDIA GPU code class_PSD_monitor_trace: 10771, Generating acc routine seq Generating NVIDIA GPU code raytrace: 10873, Generating acc routine seq Generating NVIDIA GPU code raytrace_all: 11247, Generating implicit firstprivate(gpu_innerloop) Generating NVIDIA GPU code 11258, #pragma acc loop gang(numgangs), vector(vecsize) /* blockIdx.x threadIdx.x */ 11247, Local memory used for .inl_particle_14870,particleN,.inl_.inl_mcphoton_0_14886,.inl_.X1910_14888,.inl_.inl_.X2107_13_14887 11258, Generating implicit firstprivate(seed,_particle) finally: 11938, Generating update self(_Origin_var,_detector_var,_mirror_var,_mirrorexit_var,_psdin3_var,_xmirrorrot_var,_ymirrorrot_var,_instrument_var,_mirrormnt_var,_mirrorentryslit_var,_mirrorout_var,_pinhole3_var,_pinhole1_var,_psd1_var,_psdin1_var,_pinhole2_var,_psdin2_var,_Source_var,_energy_BEF_var) mcenabletrace: 5656, Generating update device(mcdotrace) /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/tools/../miniconda3/bin//ld: warning: /tmp/pgcudafatOIHYb4T4uejQC.o: missing .note.GNU-stack section implies executable stack /u/data/pkwi/McXtrace/mcxtrace/3.x-dev/tools/../miniconda3/bin//ld: NOTE: This behaviour is deprecated and will be removed in a future version of the linker DEBUG: CMD: nvc finished INFO: ===