loading system configuration loading override configuration from /users/willend/mxtest/mctest/../mccodelib/mcxtrace-test/McXtrace_DUAL_A100_DMSC/mccode_config.json INFO: Using directory: "6" INFO: Using existing c-file: ./Test_SAXS.c INFO: Using existing binary: ./Test_SAXS.out INFO: === -------------------------------------------------------------------------- WARNING: No preset parameters were found for the device that Open MPI detected: Local host: r6n22 Device name: mlx5_0 Device vendor ID: 0x02c9 Device vendor part ID: 4123 Default device parameters will be used, which may result in lower performance. You can edit any of the files specified by the btl_openib_device_param_files MCA parameter to set values for your device. NOTE: You can turn off this warning by setting the MCA parameter btl_openib_warn_no_device_params_found to 0. -------------------------------------------------------------------------- Simulation 'Test_SAXS' (/users/willend/xTESTS/2023-07-01/McXtrace_DUAL_A100_DMSC_5e7/Test_SAXS/Test_SAXS.instr): running on 2 nodes (master is 'r6n22.esss.dk', MPI version 3.1). Have found 2 GPU devices on rank 0. Will use device 0. Have found 2 GPU devices on rank 1. Will use device 1. [Test_SAXS] Initialize [Test_SAXS] Initialize SAXSPDB: Sample7: Scattering from 3v03.pdb with 1160 residues [r6n22.esss.dk:1307143] 1 more process has sent help message help-mpi-btl-openib.txt / no device params found [r6n22.esss.dk:1307143] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages SAXSPDBFast: Sample11: Initializing scattering from 6lyz.pdb with 129 residues on 2000 Q-values SAXSPDBFast: Sample11: 6lyz.pdb initialization I(q) done NOTE: CPU COMPONENT grammar activated: 1) "FUNNEL" raytrace algorithm enabled. 2) Any SPLIT's are dynamically allocated based on available buffer size. Save [Test_SAXS] Detector: PSDMonitor_I=1.14444e-14 PSDMonitor_ERR=8.53004e-16 PSDMonitor_N=3009 "PSDMonitor.dat" Detector: QMonitor_I=2.62765e-10 QMonitor_ERR=5.51644e-11 QMonitor_N=4554 "RDetectror.dat" Detector: QMonitor_I=1.06375e-09 QMonitor_ERR=2.22553e-10 QMonitor_N=4554 "QDetector.dat" Finally [Test_SAXS: 6]. Time: 14 [s] Finally [Test_SAXS: 6]. Time: 14 [s] INFO: Placing instr file copy /users/willend/xTESTS/2023-07-01/McXtrace_DUAL_A100_DMSC_5e7/Test_SAXS/Test_SAXS.instr in dataset 6