loading system configuration loading override configuration from /home/nexmap/pkwi/mxtest/mctest/../mccodelib/mcxtrace-test/McXtrace_CPU_MPICC_KISS/mccode_config.json INFO: Using directory: "1" INFO: Using existing c-file: ./SOLEIL_ANATOMIX.c INFO: Using existing binary: ./SOLEIL_ANATOMIX.out INFO: === Simulation 'SOLEIL_ANATOMIX' (/home/nexmap/pkwi/xTESTS/2023-02-01/McXtrace_CPU_MPICC_KISS_5e7/SOLEIL_ANATOMIX/SOLEIL_ANATOMIX.instr): running on 16 nodes (master is 'elearn1.fysik.dtu.dk', MPI version 3.1). SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] [SOLEIL_ANATOMIX] Initialize SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] [SOLEIL_ANATOMIX] Initialize SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize SOLEIL_ANATOMIX: Monochromator energy=17 [keV], angle=6.67856 [deg] [SOLEIL_ANATOMIX] Initialize [SOLEIL_ANATOMIX] Initialize Monitor_nD: e_repartition_before_cc is using automatic limits option 'auto' together with MPI. WARNING this may create incorrect distributions (but integrated flux will be right). Opening input file '/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/Si.txt' (Table_Read_Offset) Opening input file '/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/FormFactors.txt' (Table_Read_Offset) Reusing input file 'Si.txt' (Table_Read_Offset) Reusing input file 'FormFactors.txt' (Table_Read_Offset) Loading geometry file (OFF/PLY): wire.ply Number of vertices: 2584 Number of polygons: 5438 Bounding box dimensions for geometry wire.ply: Length=0.020000 (11.530%) Width= 0.008997 (11.530%) Depth= 0.016806 (11.530%) Opening input file '/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/Be.txt' (Table_Read_Offset) WARNING: (Table_Rebin): Rebinning table from Be.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Be.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Be.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Be.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Be.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Be.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Be.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Be.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Be.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Be.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Be.txt would exceed 1M rows. Skipping. sample: Rebinning material data (Be.txt) for faster tracing...done sample: Rebinning material data (Be.txt) for faster tracing...done sample: Rebinning material data (Be.txt) for faster tracing...done sample: Rebinning material data (Be.txt) for faster tracing...done sample: Rebinning material data (Be.txt) for faster tracing...done sample: Rebinning material data (Be.txt) for faster tracing...done sample: Rebinning material data (Be.txt) for faster tracing...done sample: Rebinning material data (Be.txt) for faster tracing...done sample: Rebinning material data (Be.txt) for faster tracing...done sample: Rebinning material data (Be.txt) for faster tracing...done sample: Rebinning material data (Be.txt) for faster tracing...done sample: Rebinning material data (Be.txt) for faster tracing...done sample: Rebinning material data (Be.txt) for faster tracing...done sample: Rebinning material data (Be.txt) for faster tracing...done sample: Rebinning material data (Be.txt) for faster tracing...done WARNING: (Table_Rebin): Rebinning table from Be.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Be.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Be.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Be.txt would exceed 1M rows. Skipping. WARNING: (Table_Rebin): Rebinning table from Be.txt would exceed 1M rows. Skipping. sample: Rebinning material data (Be.txt) for faster tracing...done Trace ETA 7.43333 [min] % 2 Trace ETA 7.43333 [min] % 2 Trace ETA 7.33333 [min] % 2 Trace ETA 7.43333 [min] % 2 Trace ETA 7.33333 [min] % 2 Trace ETA 7.33333 [min] % 2 Trace ETA 7.33333 [min] % 2 Trace ETA 7.33333 [min] % 2 Trace ETA 7.33333 [min] % 2 Trace ETA 7.33333 [min] % 2 Trace ETA 7.33333 [min] % 2 Trace ETA 7.33333 [min] % 2 Trace ETA 7.33333 [min] % 2 Trace ETA 7.33333 [min] % 2 Trace ETA 7.33333 [min] % 2 Trace ETA 7.33333 [min] % 2 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 30 30 30 30 30 30 30 30 30 30 30 30 30 30 30 30 40 40 40 40 40 40 40 40 40 40 40 40 40 40 40 40 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 60 60 60 60 60 60 60 60 60 60 60 60 60 60 60 60 70 70 70 70 70 70 70 70 70 70 70 70 70 70 70 70 80 80 80 80 80 80 80 80 80 80 80 80 80 80 80 80 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 *** TRACE end *** Save [SOLEIL_ANATOMIX] Detector: e_repartition_before_cc_I=2.69051e+11 e_repartition_before_cc_ERR=4.71281e+07 e_repartition_before_cc_N=4.99992e+07 "e_repartition_before_cc.E_y" Detector: psd_monitor_before_cc_I=2.69056e+11 psd_monitor_before_cc_ERR=4.71286e+07 psd_monitor_before_cc_N=5e+07 "psd_monitor_before_cc.dat" Detector: psd_after_cc_I=1.90657e+08 psd_after_cc_ERR=1.13686e+06 psd_after_cc_N=5e+07 "psd_after_cc2.dat" Detector: e_monitor_before_sample_I=1.90657e+08 e_monitor_before_sample_ERR=1.13686e+06 e_monitor_before_sample_N=5e+07 "e_monitor_before_sample.dat" Detector: psd_repartition_after_cc_I=1.90657e+08 psd_repartition_after_cc_ERR=1.13686e+06 psd_repartition_after_cc_N=5e+07 "psd_repartition_after_cc.dat" Detector: e_monitor_after_sample_I=1.88347e+08 e_monitor_after_sample_ERR=1.12348e+06 e_monitor_after_sample_N=4.99647e+07 "e_monitor_after_sample.dat" Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Detector: psd_monitor_after_cc_I=1.8832e+08 psd_monitor_after_cc_ERR=1.12338e+06 psd_monitor_after_cc_N=4.99615e+07 "psd_monitor_after_sample.dat" Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.33333 [min] Finally [SOLEIL_ANATOMIX: 1]. Time: 7.35 [min] INFO: Placing instr file copy /home/nexmap/pkwi/xTESTS/2023-02-01/McXtrace_CPU_MPICC_KISS_5e7/SOLEIL_ANATOMIX/SOLEIL_ANATOMIX.instr in dataset 1