loading system configuration loading override configuration from /zhome/89/0/38697/mxtest/mctest/../mccodelib/mcxtrace-test/McXtrace_CPU_MPICC_KISS/mccode_config.json INFO: Using directory: "1" INFO: Using existing c-file: ./MAXII_711.c INFO: Using existing binary: ./MAXII_711.out WARNING: Ignoring invalid parameter: "MAXII_711.instr" INFO: === INFO: Using system default number of mpirun -np processes -------------------------------------------------------------------------- By default, for Open MPI 4.0 and later, infiniband ports on a device are not used by default. The intent is to use UCX for these devices. You can override this policy by setting the btl_openib_allow_ib MCA parameter to true. Local host: n-62-29-34 Local adapter: mlx4_0 Local port: 1 -------------------------------------------------------------------------- -------------------------------------------------------------------------- WARNING: There was an error initializing an OpenFabrics device. Local host: n-62-29-34 Local device: mlx4_0 -------------------------------------------------------------------------- Simulation 'MAXII_711' (/zhome/89/0/38697/xTESTS/2022-12-01/McXtrace_CPU_MPICC_KISS_5e7/MAXII_711/MAXII_711.instr): running on 10 nodes (master is 'n-62-29-34', MPI version 3.1). [MAXII_711] Initialize [MAXII_711] Initialize [MAXII_711] Initialize Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/Pt.txt' (Table_Read_Offset) [MAXII_711] Initialize [MAXII_711] Initialize [MAXII_711] Initialize [MAXII_711] Initialize [MAXII_711] Initialize [MAXII_711] Initialize INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/Si.txt' (Table_Read_Offset) Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/FormFactors.txt' (Table_Read_Offset) WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability [MAXII_711] Initialize Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/C_diamond.laz' (Table_Read_Offset) INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability Table from file 'C_diamond.laz' (block 1) is 16 x 18 (x=1:6), constant step. interpolation: linear '# TITLE *Diamond-C-[FD3-MS] Fayos, J.[1999];# CELL 3.567000 3.567000 3.5670 ...' PowderN: sample: Reading 16 rows from C_diamond.laz PowderN: sample: Read 16 reflections from file 'C_diamond.laz' PowderN: sample: WARNING: You have requested statistics for incoherent scattering but not set a material datafile ('C.txt') nor defined sigma_inc! Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/C.txt' (Table_Read_Offset) [n-62-29-34:15862] 9 more processes have sent help message help-mpi-btl-openib.txt / ib port not selected [n-62-29-34:15862] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages [n-62-29-34:15862] 9 more processes have sent help message help-mpi-btl-openib.txt / error in device init Trace ETA 33 [s] % 32 Trace ETA 33 [s] % 32 Trace ETA 33 [s] % 32 Trace ETA 33 [s] % 32 Trace ETA 34 [s] % 32 Trace ETA 33 [s] % 32 Trace ETA 33 [s] % 32 Trace ETA 33 [s] % 32 Trace ETA 33 [s] % 32 Trace ETA 33 [s] % 32 40 40 40 40 40 40 40 40 40 40 50 50 50 50 50 50 50 50 50 50 60 60 60 60 60 60 60 60 60 60 70 70 70 70 70 70 70 70 70 70 80 80 80 80 80 80 80 80 80 80 90 90 90 90 90 90 90 90 90 90 *** TRACE end *** Save [MAXII_711] Detector: source_mon_I=2.39043 source_mon_ERR=0.000338365 source_mon_N=4.99686e+07 "source_mon.dat" Detector: mirror_exit_lmon_I=0.00926433 mirror_exit_lmon_ERR=1.31255e-06 mirror_exit_lmon_N=5e+07 "mi_lmon.dat" Detector: mirror_exit_psd_I=0.00904161 mirror_exit_psd_ERR=1.29668e-06 mirror_exit_psd_N=4.87979e+07 "mi_psd.dat" Detector: mono_exit_lmon_I=5.22654e-06 mono_exit_lmon_ERR=2.69274e-08 mono_exit_lmon_N=2.31602e+07 "me_lmon.dat" Detector: mono_exit_psd_I=5.22566e-06 mono_exit_psd_ERR=2.69249e-08 mono_exit_psd_N=2.31584e+07 "me_psd.dat" Detector: sample_mon_I=2.7595e-07 sample_mon_ERR=6.24646e-09 sample_mon_N=1.1785e+06 "sample_mon.dat" Detector: psd4pi_I=8.11636e-11 psd4pi_ERR=2.9332e-11 psd4pi_N=144352 "psd4pi.dat" Detector: bigpsd_I=1.06698e-12 bigpsd_ERR=3.58996e-13 bigpsd_N=36256 "bigpsd.dat" Detector: bigradial_I=3.65904e-12 bigradial_ERR=1.8799e-12 bigradial_N=46770 "bigradial.dat" Finally [MAXII_711: 1]. Time: 33 [s] Finally [MAXII_711: 1]. Time: 33 [s] Detector: detector_I=8.05022e-14 detector_ERR=2.36399e-14 detector_N=7289 "psd.dat" Finally [MAXII_711: 1]. Time: 33 [s] Finally [MAXII_711: 1]. Time: 33 [s] Finally [MAXII_711: 1]. Time: 33 [s] Finally [MAXII_711: 1]. Time: 33 [s] Finally [MAXII_711: 1]. Time: 33 [s] Finally [MAXII_711: 1]. Time: 33 [s] Finally [MAXII_711: 1]. Time: 33 [s] Finally [MAXII_711: 1]. Time: 33 [s] INFO: Placing instr file copy /zhome/89/0/38697/xTESTS/2022-12-01/McXtrace_CPU_MPICC_KISS_5e7/MAXII_711/MAXII_711.instr in dataset 1