loading system configuration loading override configuration from /zhome/89/0/38697/mxtest/mctest/../mccodelib/mcxtrace-test/McXtrace_CPU_MPICC_KISS/mccode_config.json INFO: Using directory: "1" INFO: Using existing c-file: ./SOLEIL_MARS.c INFO: Using existing binary: ./SOLEIL_MARS.out INFO: === INFO: Using system default number of mpirun -np processes -------------------------------------------------------------------------- By default, for Open MPI 4.0 and later, infiniband ports on a device are not used by default. The intent is to use UCX for these devices. You can override this policy by setting the btl_openib_allow_ib MCA parameter to true. Local host: n-62-29-12 Local adapter: mlx4_0 Local port: 1 -------------------------------------------------------------------------- -------------------------------------------------------------------------- WARNING: There was an error initializing an OpenFabrics device. Local host: n-62-29-12 Local device: mlx4_0 -------------------------------------------------------------------------- Simulation 'SOLEIL_MARS' (/zhome/89/0/38697/xTESTS/2022-12-01/McXtrace_CPU_MPICC_KISS_1e7/SOLEIL_MARS/SOLEIL_MARS.instr): running on 10 nodes (master is 'n-62-29-12', MPI version 3.1). [SOLEIL_MARS] Initialize [SOLEIL_MARS] Initialize Warning (Source): Bending_magnet is an experimental component - testing is ongoing Warning (Source): Bending_magnet is an experimental component - testing is ongoing Warning (Source): Bending_magnet is an experimental component - testing is ongoing [SOLEIL_MARS] Initialize Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/Pt.dat' (Table_Read_Offset) [SOLEIL_MARS] Initialize Warning (Source): Bending_magnet is an experimental component - testing is ongoing [SOLEIL_MARS] Initialize Warning (Source): Bending_magnet is an experimental component - testing is ongoing [SOLEIL_MARS] Initialize Warning (Source): Bending_magnet is an experimental component - testing is ongoing [SOLEIL_MARS] Initialize Warning (Source): Bending_magnet is an experimental component - testing is ongoing [SOLEIL_MARS] Initialize Warning (Source): Bending_magnet is an experimental component - testing is ongoing [SOLEIL_MARS] Initialize Warning (Source): Bending_magnet is an experimental component - testing is ongoing [SOLEIL_MARS] Initialize Warning (Source): Bending_magnet is an experimental component - testing is ongoing INFO (reflectivity-lib) reflectivity parameterization type: 'eth' INFO (reflectivity-lib) reflectivity parameterization type: 'eth' INFO (reflectivity-lib) reflectivity parameterization type: 'eth' INFO (reflectivity-lib) reflectivity parameterization type: 'eth' INFO (reflectivity-lib) reflectivity parameterization type: 'eth' INFO (reflectivity-lib) reflectivity parameterization type: 'eth' INFO (reflectivity-lib) reflectivity parameterization type: 'eth' INFO (reflectivity-lib) reflectivity parameterization type: 'eth' INFO (reflectivity-lib) reflectivity parameterization type: 'eth' INFO (reflectivity-lib) reflectivity parameterization type: 'eth' Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/Silicon.dat' (Table_Read_Offset) Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/FormFactors.txt' (Table_Read_Offset) INFO (reflectivity-lib) reflectivity parameterization type: 'eth' WARNING(Sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability Reusing input file 'Silicon.dat' (Table_Read_Offset) Reusing input file 'FormFactors.txt' (Table_Read_Offset) Reusing input file 'Pt.dat' (Table_Read_Offset) INFO (reflectivity-lib) reflectivity parameterization type: 'eth' INFO (reflectivity-lib) reflectivity parameterization type: 'eth' WARNING(Sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability INFO (reflectivity-lib) reflectivity parameterization type: 'eth' WARNING(Sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(Sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability INFO (reflectivity-lib) reflectivity parameterization type: 'eth' INFO (reflectivity-lib) reflectivity parameterization type: 'eth' INFO (reflectivity-lib) reflectivity parameterization type: 'eth' INFO (reflectivity-lib) reflectivity parameterization type: 'eth' WARNING(Sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(Sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(Sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(Sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability INFO (reflectivity-lib) reflectivity parameterization type: 'eth' WARNING(Sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability INFO (reflectivity-lib) reflectivity parameterization type: 'eth' WARNING(Sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability Table from file 'LaB6_660b_AVID2.hkl' (block 1) is 1453 x 6 (x=1:23), constant step. interpolation: linear '# TITLE La1 B6 [Cubic, Centric (-1 at origin)];# a b ...' PowderN: Sample: Reading 1453 rows from LaB6_660b_AVID2.hkl PowderN: Sample: Powder file probably of type Crystallographica/Fullprof (lau) WARNING: but F2 unit is set to barns=1 (barns). Intensity might be 100 times too high. PowderN: Sample: Read 1453 reflections from file 'LaB6_660b_AVID2.hkl' PowderN: Sample: WARNING: You have requested statistics for incoherent scattering but not set a material datafile ('Si.txt') nor defined sigma_inc! Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/Si.txt' (Table_Read_Offset) [n-62-29-12:21247] 9 more processes have sent help message help-mpi-btl-openib.txt / ib port not selected [n-62-29-12:21247] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages [n-62-29-12:21247] 9 more processes have sent help message help-mpi-btl-openib.txt / error in device init Trace ETA 22 [s] % 49 Trace ETA 22 [s] % 49 Trace ETA 22 [s] % 48 Trace ETA 22 [s] % 49 Trace ETA 22 [s] % 49 Trace ETA 22 [s] % 48 Trace ETA 22 [s] % 49 Trace ETA 22 [s] % 49 Trace ETA 22 [s] % 49 Trace ETA 22 [s] % 49 50 50 50 50 50 50 50 50 50 50 60 60 60 60 60 60 60 60 60 60 70 70 70 70 70 70 70 70 70 70 80 80 80 80 80 80 80 80 80 80 90 90 90 90 90 90 90 90 90 90 *** TRACE end *** Save [SOLEIL_MARS] Detector: displaySourceLenght_I=6.15731e+12 displaySourceLenght_ERR=2.97692e+09 displaySourceLenght_N=1e+07 "Output1.L" Detector: displaySource_I=6.15731e+12 displaySource_ERR=2.97692e+09 displaySource_N=1e+07 "emon_psd1.dat" Detector: emon_dcm0_I=0 emon_dcm0_ERR=0 emon_dcm0_N=0 "emon_dcm0.dat" Detector: displayMono_I=0.000233817 displayMono_ERR=1.4095e-07 displayMono_N=9.49091e+06 "emon_psd.dat" Detector: displayMonoLenght_I=0.000233817 displayMonoLenght_ERR=1.4095e-07 displayMonoLenght_N=9.49091e+06 "Output.L" Detector: emon_dcm1_I=1.09903e-05 emon_dcm1_ERR=3.21028e-08 emon_dcm1_N=174847 "BeamMonitor2.dat" Detector: displaySlit2_I=8.98955e-05 displaySlit2_ERR=9.18198e-08 displaySlit2_N=1.43234e+06 "emon_psd3.dat" Finally [SOLEIL_MARS: 1]. Time: 21 [s] Detector: displayMonoLenght1_I=2.54106e-07 displayMonoLenght1_ERR=5.6963e-10 displayMonoLenght1_N=2.64992e+07 "displayMonoLenght1_1669890674.th" Finally [SOLEIL_MARS: 1]. Time: 21 [s] Finally [SOLEIL_MARS: 1]. Time: 21 [s] Finally [SOLEIL_MARS: 1]. Time: 21 [s] Finally [SOLEIL_MARS: 1]. Time: 21 [s] Finally [SOLEIL_MARS: 1]. Time: 21 [s] Finally [SOLEIL_MARS: 1]. Time: 21 [s] Finally [SOLEIL_MARS: 1]. Time: 21 [s] Finally [SOLEIL_MARS: 1]. Time: 21 [s] Finally [SOLEIL_MARS: 1]. Time: 22 [s] INFO: Placing instr file copy /zhome/89/0/38697/xTESTS/2022-12-01/McXtrace_CPU_MPICC_KISS_1e7/SOLEIL_MARS/SOLEIL_MARS.instr in dataset 1