loading system configuration loading override configuration from /zhome/89/0/38697/mxtest/mctest/../mccodelib/mcxtrace-test/McXtrace_CPU_MPICC_KISS/mccode_config.json INFO: Using directory: "1" INFO: Using existing c-file: ./MAXII_711.c INFO: Using existing binary: ./MAXII_711.out WARNING: Ignoring invalid parameter: "MAXII_711.instr" INFO: === INFO: Using system default number of mpirun -np processes -------------------------------------------------------------------------- By default, for Open MPI 4.0 and later, infiniband ports on a device are not used by default. The intent is to use UCX for these devices. You can override this policy by setting the btl_openib_allow_ib MCA parameter to true. Local host: n-62-29-12 Local adapter: mlx4_0 Local port: 1 -------------------------------------------------------------------------- -------------------------------------------------------------------------- WARNING: There was an error initializing an OpenFabrics device. Local host: n-62-29-12 Local device: mlx4_0 -------------------------------------------------------------------------- Simulation 'MAXII_711' (/zhome/89/0/38697/xTESTS/2022-12-01/McXtrace_CPU_MPICC_KISS_1e7/MAXII_711/MAXII_711.instr): running on 10 nodes (master is 'n-62-29-12', MPI version 3.1). [MAXII_711] Initialize [MAXII_711] Initialize [MAXII_711] Initialize INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. [MAXII_711] Initialize [MAXII_711] Initialize [MAXII_711] Initialize [MAXII_711] Initialize [MAXII_711] Initialize [MAXII_711] Initialize WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. [MAXII_711] Initialize Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/Pt.txt' (Table_Read_Offset) INFO (reflectivity-lib): Datafile type not explicit in reflectivity file. Inferring type COATING from datafile. Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/Si.txt' (Table_Read_Offset) WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/FormFactors.txt' (Table_Read_Offset) WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_interact=0, adjusting to 0.01, to avoid algorithm instability WARNING(sample): p_inc=0, adjusting to 0.01, to avoid algorithm instability Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/C_diamond.laz' (Table_Read_Offset) Table from file 'C_diamond.laz' (block 1) is 16 x 18 (x=1:6), constant step. interpolation: linear '# TITLE *Diamond-C-[FD3-MS] Fayos, J.[1999];# CELL 3.567000 3.567000 3.5670 ...' PowderN: sample: Reading 16 rows from C_diamond.laz PowderN: sample: Read 16 reflections from file 'C_diamond.laz' PowderN: sample: WARNING: You have requested statistics for incoherent scattering but not set a material datafile ('C.txt') nor defined sigma_inc! Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/C.txt' (Table_Read_Offset) [n-62-29-12:16328] 9 more processes have sent help message help-mpi-btl-openib.txt / ib port not selected [n-62-29-12:16328] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages [n-62-29-12:16328] 9 more processes have sent help message help-mpi-btl-openib.txt / error in device init *** TRACE end *** Save [MAXII_711] Detector: source_mon_I=2.3904 source_mon_ERR=0.000756599 source_mon_N=9.99367e+06 "source_mon.dat" Detector: mirror_exit_lmon_I=0.0092643 mirror_exit_lmon_ERR=2.93494e-06 mirror_exit_lmon_N=1e+07 "mi_lmon.dat" Detector: mirror_exit_psd_I=0.00904174 mirror_exit_psd_ERR=2.89948e-06 mirror_exit_psd_N=9.75976e+06 "mi_psd.dat" Detector: mono_exit_lmon_I=5.2387e-06 mono_exit_lmon_ERR=6.02468e-08 mono_exit_lmon_N=4.63221e+06 "me_lmon.dat" Detector: mono_exit_psd_I=5.2378e-06 mono_exit_psd_ERR=6.02405e-08 mono_exit_psd_N=4.63184e+06 "me_psd.dat" Detector: sample_mon_I=2.72709e-07 sample_mon_ERR=1.3851e-08 sample_mon_N=235956 "sample_mon.dat" Detector: psd4pi_I=1.75471e-10 psd4pi_ERR=1.15353e-10 psd4pi_N=29113 "psd4pi.dat" Detector: bigpsd_I=1.26579e-12 bigpsd_ERR=9.31327e-13 bigpsd_N=7310 "bigpsd.dat" Detector: bigradial_I=2.0584e-12 bigradial_ERR=1.06597e-12 bigradial_N=9451 "bigradial.dat" Finally [MAXII_711: 1]. Time: 7 [s] Finally [MAXII_711: 1]. Time: 7 [s] Detector: detector_I=2.04003e-14 detector_ERR=8.47116e-15 detector_N=1513 "psd.dat" Finally [MAXII_711: 1]. Time: 7 [s] Finally [MAXII_711: 1]. Time: 7 [s] Finally [MAXII_711: 1]. Time: 7 [s] Finally [MAXII_711: 1]. Time: 7 [s] Finally [MAXII_711: 1]. Time: 7 [s] Finally [MAXII_711: 1]. Time: 7 [s] Finally [MAXII_711: 1]. Time: 7 [s] Finally [MAXII_711: 1]. Time: 7 [s] INFO: Placing instr file copy /zhome/89/0/38697/xTESTS/2022-12-01/McXtrace_CPU_MPICC_KISS_1e7/MAXII_711/MAXII_711.instr in dataset 1