loading system configuration loading override configuration from /zhome/89/0/38697/mxtest/mctest/../mccodelib/mcxtrace-test/McXtrace-1.x_CPU_MPICC/mccode_config.json INFO: Using directory: "1" INFO: Using existing c-file: ./Test_Saxs_spheres.c INFO: Using existing binary: ./Test_Saxs_spheres.out WARNING: Ignoring invalid parameter: "Test_Saxs_spheres.instr" INFO: === INFO: Using system default number of mpirun -np processes -------------------------------------------------------------------------- By default, for Open MPI 4.0 and later, infiniband ports on a device are not used by default. The intent is to use UCX for these devices. You can override this policy by setting the btl_openib_allow_ib MCA parameter to true. Local host: n-62-29-31 Local adapter: mlx4_0 Local port: 1 -------------------------------------------------------------------------- -------------------------------------------------------------------------- WARNING: There was an error initializing an OpenFabrics device. Local host: n-62-29-31 Local device: mlx4_0 -------------------------------------------------------------------------- Simulation 'Test_Saxs_spheres' (/zhome/89/0/38697/xTESTS/2022-12-01/McXtrace-1.x_CPU_MPICC_1e7/Test_Saxs_spheres/Test_Saxs_spheres.instr): running on 10 nodes (master is 'n-62-29-31', MPI version 3.1). [Test_Saxs_spheres] Initialize [Test_Saxs_spheres] Initialize [Test_Saxs_spheres] Initialize Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/1.x-dev/tools/Python/mxrun/../mccodelib/../../../data/Be.txt' (Table_Read_Offset) [Test_Saxs_spheres] Initialize [Test_Saxs_spheres] Initialize [Test_Saxs_spheres] Initialize [Test_Saxs_spheres] Initialize [Test_Saxs_spheres] Initialize [Test_Saxs_spheres] Initialize [Test_Saxs_spheres] Initialize Finally [Test_Saxs_spheres: 1]. Time: 1 [s] Finally [Test_Saxs_spheres: 1]. Time: 1 [s] Finally [Test_Saxs_spheres: 1]. Time: 1 [s] Finally [Test_Saxs_spheres: 1]. Time: 1 [s] Save [Test_Saxs_spheres] Finally [Test_Saxs_spheres: 1]. Time: 1 [s] Finally [Test_Saxs_spheres: 1]. Time: 1 [s] Detector: psd0_I=7.95775e-10 psd0_ERR=2.51646e-13 psd0_N=1e+07 "psd0.dat" Finally [Test_Saxs_spheres: 1]. Time: 1 [s] Finally [Test_Saxs_spheres: 1]. Time: 1 [s] Detector: psd4pi_I=1.48808e-15 psd4pi_ERR=2.8674e-18 psd4pi_N=4.99959e+06 "psd4pi.dat" Detector: detector_I=1.48808e-15 detector_ERR=2.8674e-18 detector_N=4.99959e+06 "psd1.dat" Finally [Test_Saxs_spheres: 1]. Time: 1 [s] Detector: detector2_I=5.11955e-16 detector2_ERR=2.13453e-18 detector2_N=71611 "psd2.dat" Finally [Test_Saxs_spheres: 1]. Time: 1 [s] [n-62-29-31:08597] 9 more processes have sent help message help-mpi-btl-openib.txt / ib port not selected [n-62-29-31:08597] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages [n-62-29-31:08597] 9 more processes have sent help message help-mpi-btl-openib.txt / error in device init INFO: Placing instr file copy /zhome/89/0/38697/xTESTS/2022-12-01/McXtrace-1.x_CPU_MPICC_1e7/Test_Saxs_spheres/Test_Saxs_spheres.instr in dataset 1