loading system configuration loading override configuration from /zhome/89/0/38697/mxtest/mctest/../mccodelib/mcxtrace-test/McXtrace_CPU_MPICC_KISS/mccode_config.json INFO: Using directory: "1" INFO: Using existing c-file: ./Airport_scannerII.c INFO: Using existing binary: ./Airport_scannerII.out WARNING: Ignoring invalid parameter: "Airport_scannerII.instr" INFO: === INFO: Using system default number of mpirun -np processes -------------------------------------------------------------------------- By default, for Open MPI 4.0 and later, infiniband ports on a device are not used by default. The intent is to use UCX for these devices. You can override this policy by setting the btl_openib_allow_ib MCA parameter to true. Local host: n-62-29-35 Local adapter: mlx4_0 Local port: 1 -------------------------------------------------------------------------- -------------------------------------------------------------------------- WARNING: There was an error initializing an OpenFabrics device. Local host: n-62-29-35 Local device: mlx4_0 -------------------------------------------------------------------------- Simulation 'Airp_scannerII' (/zhome/89/0/38697/xTESTS/2022-11-01/McXtrace_CPU_MPICC_KISS_5e7/Airport_scannerII/Airport_scannerII.instr): running on 10 nodes (master is 'n-62-29-32', MPI version 3.1). [Airp_scannerII] Initialize [Airp_scannerII] Initialize [Airp_scannerII] Initialize [Airp_scannerII] Initialize Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/book.txt' (Table_Read_Offset) Loading geometry file (OFF/PLY): book.ply [Airp_scannerII] Initialize [Airp_scannerII] Initialize Number of vertices: 2853 [Airp_scannerII] Initialize [Airp_scannerII] Initialize [Airp_scannerII] Initialize [Airp_scannerII] Initialize Number of polygons: 5722 sample_scan: Volume[1], material='book.txt' geometry='book.ply' sample_scan: Volume[1], material='book.txt' geometry='book.ply' Warning: Neither xwidth, yheight or zdepth are defined. The file-defined (non-scaled) geometry the OFF geometry book.ply will be applied! Bounding box dimensions for geometry book.ply: Length=0.239599 (100.000%) sample_scan: Volume[1], material='book.txt' geometry='book.ply' Width= 0.029804 (100.000%) Depth= 0.164529 (100.000%) sample_scan: Volume[1], material='book.txt' geometry='book.ply' Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/h2o2.dat' (Table_Read_Offset) Loading geometry file (OFF/PLY): h2o2.ply Number of vertices: 406 Number of polygons: 808 sample_scan: Volume[2], material='h2o2.dat' geometry='h2o2.ply' sample_scan: Volume[2], material='h2o2.dat' geometry='h2o2.ply' Warning: Neither xwidth, yheight or zdepth are defined. The file-defined (non-scaled) geometry the OFF geometry h2o2.ply will be applied! Bounding box dimensions for geometry h2o2.ply: Length=0.126295 (100.000%) Width= 0.046911 (100.000%) Depth= 0.090087 (100.000%) sample_scan: Volume[2], material='h2o2.dat' geometry='h2o2.ply' sample_scan: Volume[2], material='h2o2.dat' geometry='h2o2.ply' Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/H2O.txt' (Table_Read_Offset) Loading geometry file (OFF/PLY): water.ply sample_scan: Volume[1], material='book.txt' geometry='book.ply' sample_scan: Volume[1], material='book.txt' geometry='book.ply' sample_scan: Volume[1], material='book.txt' geometry='book.ply' Number of vertices: 818 sample_scan: Volume[1], material='book.txt' geometry='book.ply' sample_scan: Volume[1], material='book.txt' geometry='book.ply' sample_scan: Volume[1], material='book.txt' geometry='book.ply' Number of polygons: 1632 sample_scan: Volume[3], material='H2O.txt' geometry='water.ply' Warning: Neither xwidth, yheight or zdepth are defined. The file-defined (non-scaled) geometry the OFF geometry water.ply will be applied! Bounding box dimensions for geometry water.ply: Length=0.066238 (100.000%) Width= 0.058313 (100.000%) Depth= 0.217547 (100.000%) sample_scan: Volume[3], material='H2O.txt' geometry='water.ply' sample_scan: Volume[3], material='H2O.txt' geometry='water.ply' sample_scan: Volume[3], material='H2O.txt' geometry='water.ply' sample_scan: Volume[2], material='h2o2.dat' geometry='h2o2.ply' sample_scan: Volume[2], material='h2o2.dat' geometry='h2o2.ply' Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/ethanol.txt' (Table_Read_Offset) Loading geometry file (OFF/PLY): whiskey.ply sample_scan: Volume[2], material='h2o2.dat' geometry='h2o2.ply' sample_scan: Volume[2], material='h2o2.dat' geometry='h2o2.ply' sample_scan: Volume[2], material='h2o2.dat' geometry='h2o2.ply' sample_scan: Volume[2], material='h2o2.dat' geometry='h2o2.ply' Number of vertices: 616 Number of polygons: 1228 sample_scan: Volume[4], material='ethanol.txt' geometry='whiskey.ply' sample_scan: Volume[4], material='ethanol.txt' geometry='whiskey.ply' Warning: Neither xwidth, yheight or zdepth are defined. The file-defined (non-scaled) geometry the OFF geometry whiskey.ply will be applied! Bounding box dimensions for geometry whiskey.ply: Length=0.082601 (100.000%) Width= 0.076881 (100.000%) Depth= 0.141927 (100.000%) sample_scan: Volume[4], material='ethanol.txt' geometry='whiskey.ply' sample_scan: Volume[4], material='ethanol.txt' geometry='whiskey.ply' sample_scan: Volume[3], material='H2O.txt' geometry='water.ply' sample_scan: Volume[3], material='H2O.txt' geometry='water.ply' Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/Cu.txt' (Table_Read_Offset) sample_scan: Volume[3], material='H2O.txt' geometry='water.ply' sample_scan: Volume[3], material='H2O.txt' geometry='water.ply' sample_scan: Volume[3], material='H2O.txt' geometry='water.ply' sample_scan: Volume[3], material='H2O.txt' geometry='water.ply' Loading geometry file (OFF/PLY): wire.ply sample_scan: Volume[4], material='ethanol.txt' geometry='whiskey.ply' sample_scan: Volume[4], material='ethanol.txt' geometry='whiskey.ply' Number of vertices: 2584 sample_scan: Volume[4], material='ethanol.txt' geometry='whiskey.ply' sample_scan: Volume[4], material='ethanol.txt' geometry='whiskey.ply' sample_scan: Volume[4], material='ethanol.txt' geometry='whiskey.ply' sample_scan: Volume[4], material='ethanol.txt' geometry='whiskey.ply' Number of polygons: 5438 sample_scan: Volume[5], material='Cu.txt' geometry='wire.ply' sample_scan: Volume[5], material='Cu.txt' geometry='wire.ply' Warning: Neither xwidth, yheight or zdepth are defined. The file-defined (non-scaled) geometry the OFF geometry wire.ply will be applied! Bounding box dimensions for geometry wire.ply: Length=0.173456 (100.000%) Width= 0.078031 (100.000%) Depth= 0.145752 (100.000%) sample_scan: Volume[5], material='Cu.txt' geometry='wire.ply' sample_scan: Volume[5], material='Cu.txt' geometry='wire.ply' Opening input file '/zhome/89/0/38697/McXtrace/mcxtrace/3.x-dev/tools/Python/mxrun/../mccodelib/../../../data/Al.txt' (Table_Read_Offset) sample_scan: Volume[5], material='Cu.txt' geometry='wire.ply' Loading geometry file (OFF/PLY): luggage.off sample_scan: Volume[5], material='Cu.txt' geometry='wire.ply' sample_scan: Volume[5], material='Cu.txt' geometry='wire.ply' sample_scan: Volume[5], material='Cu.txt' geometry='wire.ply' sample_scan: Volume[5], material='Cu.txt' geometry='wire.ply' sample_scan: Volume[5], material='Cu.txt' geometry='wire.ply' Number of vertices: 37707 Number of polygons: 84521 sample_scan: Volume[6], material='Al.txt' geometry='luggage.off' sample_scan: Volume[6], material='Al.txt' geometry='luggage.off' sample_scan: Volume[6], material='Al.txt' geometry='luggage.off' Warning: Neither xwidth, yheight or zdepth are defined. The file-defined (non-scaled) geometry the OFF geometry luggage.off will be applied! Bounding box dimensions for geometry luggage.off: Length=0.324186 (100.000%) Width= 0.260044 (100.000%) Depth= 0.540097 (100.000%) sample_scan: Volume[6], material='Al.txt' geometry='luggage.off' sample_scan: Volume[6], material='Al.txt' geometry='luggage.off' sample_scan: Volume[6], material='Al.txt' geometry='luggage.off' sample_scan: Volume[6], material='Al.txt' geometry='luggage.off' sample_scan: Volume[6], material='Al.txt' geometry='luggage.off' sample_scan: Volume[6], material='Al.txt' geometry='luggage.off' sample_scan: Volume[6], material='Al.txt' geometry='luggage.off' [n-62-29-32:21276] 9 more processes have sent help message help-mpi-btl-openib.txt / ib port not selected [n-62-29-32:21276] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages [n-62-29-32:21276] 9 more processes have sent help message help-mpi-btl-openib.txt / error in device init Trace ETA 1.90972 [h] % 0 Trace ETA 1.90972 [h] % 0 Trace ETA 1.90972 [h] % 0 Trace ETA 1.90972 [h] % 0 Trace ETA 1.90972 [h] % 0 Trace ETA 1.90972 [h] % 0 Trace ETA 2.38083 [h] % 0 Trace ETA 2.38083 [h] % 0 Trace ETA 2.38083 [h] % 0 Trace ETA 2.38083 [h] % 0 1 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 2 2 2 2 3 3 3 3 3 3 3 3 3 3 4 4 4 4 4 4 4 4 4 4 5 5 5 5 5 5 5 5 5 5 6 6 6 6 6 6 7 6 6 6 7 6 7 7 7 7 8 8 8 7 8 7 7 7 8 8 9 9 9 9 9 9 8 8 8 8 10 10 10 10 10 10 9 9 9 9 11 11 11 11 11 11 10 10 10 10 12 12 12 12 12 12 11 11 11 11 13 13 13 13 13 13 12 12 12 12 14 14 14 14 14 14 13 15 13 13 13 15 15 15 15 15 16 16 14 14 14 14 16 16 16 16 17 17 15 15 15 15 17 17 17 17 18 18 16 16 16 16 18 18 18 18 19 19 19 17 17 17 19 17 19 19 20 20 20 20 18 20 18 18 18 20 21 21 21 21 21 19 21 19 19 19 22 22 22 22 22 22 20 23 20 20 20 23 23 23 23 23 24 24 21 21 21 21 24 24 24 25 24 25 22 22 22 22 25 25 25 26 26 25 23 23 23 23 26 26 27 26 27 26 24 24 24 24 27 27 27 28 28 27 25 25 25 25 28 28 29 28 29 28 26 29 26 26 26 29 30 30 29 29 30 27 31 27 30 27 27 31 30 30 31 32 31 32 28 31 28 28 28 31 32 33 33 32 32 29 32 29 29 29 33 34 34 33 33 33 30 30 30 30 35 34 35 34 34 34 31 31 31 31 36 35 36 35 35 35 32 37 32 32 32 36 37 36 36 36 38 33 37 38 33 33 33 37 37 37 39 39 38 34 38 34 34 34 38 38 40 40 39 39 35 39 35 35 35 39 41 41 40 40 40 36 36 40 36 36 42 42 41 41 41 37 41 37 43 37 37 43 42 42 42 42 44 38 44 38 38 38 43 43 43 43 45 45 39 39 44 39 39 44 44 46 44 46 45 40 40 45 40 40 45 47 45 47 46 41 46 41 46 41 41 48 46 48 47 47 42 47 42 49 42 42 49 47 48 48 48 50 43 50 43 48 43 43 49 49 49 51 51 44 49 44 44 44 50 50 52 50 52 50 45 45 45 51 45 51 53 51 53 51 46 52 46 46 46 52 54 52 54 52 47 53 47 47 53 47 55 53 55 53 54 48 54 48 56 48 48 54 56 54 55 49 55 57 49 49 57 49 55 55 56 58 56 50 58 50 56 50 50 56 57 59 57 59 51 57 51 51 51 57 58 60 58 60 58 52 52 52 52 58 59 61 59 61 59 53 53 59 53 53 60 62 62 60 60 54 60 54 54 54 63 61 63 61 61 55 61 64 55 62 55 55 64 62 62 62 56 65 63 56 56 65 56 63 63 63 66 64 57 66 57 57 64 57 64 67 64 65 67 58 65 58 58 58 65 68 65 66 68 59 66 59 59 59 66 69 66 67 69 67 60 60 67 60 60 70 67 68 70 68 61 68 61 61 61 71 68 71 69 69 62 69 72 62 62 62 72 69 70 70 70 63 73 63 63 63 73 70 71 71 71 74 64 74 64 71 72 64 64 72 75 72 65 75 72 73 65 65 65 73 76 73 76 66 74 73 66 66 66 74 77 74 77 75 74 67 67 75 67 67 78 75 78 76 75 68 76 68 68 68 79 76 79 77 76 69 77 80 69 69 69 77 80 78 77 78 70 81 70 70 70 78 81 79 78 82 79 71 82 71 79 71 71 80 79 83 80 72 83 80 72 72 72 81 80 84 81 84 81 73 73 73 73 82 81 85 82 85 82 74 74 83 74 74 82 86 83 86 83 75 84 75 83 87 75 75 84 87 84 76 85 88 84 76 76 76 85 88 85 86 77 89 85 77 86 77 77 89 86 87 90 86 78 87 78 90 78 78 87 88 91 87 79 88 91 79 79 79 88 92 89 88 92 89 80 80 80 80 89 93 90 89 93 90 81 81 90 81 81 94 91 90 94 91 82 91 82 95 82 82 92 91 95 92 83 92 96 83 83 93 83 96 92 93 93 97 84 84 94 84 84 97 93 94 94 98 85 95 85 85 98 85 94 95 99 95 96 86 99 86 95 86 86 96 96 97 87 96 87 97 87 87 97 98 88 97 98 88 88 88 98 99 98 89 99 89 89 89 99 99 90 90 90 90 91 91 91 91 92 92 92 92 93 93 93 93 94 94 94 94 95 95 95 95 96 96 96 96 97 97 97 97 98 98 98 98 99 99 99 99 *** TRACE end *** Save [Airp_scannerII] Detector: psd0_I=0.00103487 psd0_ERR=1.46354e-07 psd0_N=5e+07 "psd0.dat" Detector: emon_I=0.00103487 emon_ERR=1.46354e-07 emon_N=5e+07 "emon.dat" Detector: psd2_I=0.000643303 psd2_ERR=1.13545e-07 psd2_N=3.82656e+07 "psd2.dat" Finally [Airp_scannerII: 1]. Time: 2.23833 [h] Finally [Airp_scannerII: 1]. Time: 2.23833 [h] Finally [Airp_scannerII: 1]. Time: 2.23833 [h] Finally [Airp_scannerII: 1]. Time: 2.23833 [h] Detector: psd_far_I=1.17632e-05 psd_far_ERR=1.44371e-08 psd_far_N=1.53234e+06 "psdfar.dat" Finally [Airp_scannerII: 1]. Time: 2.23833 [h] Finally [Airp_scannerII: 1]. Time: 2.23833 [h] Finally [Airp_scannerII: 1]. Time: 2.23833 [h] Finally [Airp_scannerII: 1]. Time: 2.23833 [h] Finally [Airp_scannerII: 1]. Time: 2.23833 [h] Finally [Airp_scannerII: 1]. Time: 2.23833 [h] INFO: Placing instr file copy /zhome/89/0/38697/xTESTS/2022-11-01/McXtrace_CPU_MPICC_KISS_5e7/Airport_scannerII/Airport_scannerII.instr in dataset 1