loading system configuration loading override configuration from /home/nexmap/pkwi/mxtest/mctest/../mccodelib/mcxtrace-test/McXtrace-1.x_CPU_MPICC/mccode_config.json INFO: Using directory: "3" INFO: Using existing c-file: ./ESRF_ID01.c INFO: Using existing binary: ./ESRF_ID01.out WARNING: Ignoring invalid parameter: "ESRF_ID01.instr" INFO: === Simulation 'ESRF_ID01' (/home/nexmap/pkwi/xTESTS/2022-08-01/McXtrace-1.x_CPU_MPICC_5e7/ESRF_ID01/ESRF_ID01.instr): running on 16 nodes (master is 'elearn1.fysik.dtu.dk', MPI version 3.1). Target wavelength is 1.5498 AA. The monochromators will be rotated by 14.3078 degrees. Target wavelength is 1.5498 AA. The monochromators will be rotated by 14.3078 degrees. Target wavelength is 1.5498 AA. The monochromators will be rotated by 14.3078 degrees. Target wavelength is 1.5498 AA. The monochromators will be rotated by 14.3078 degrees. Target wavelength is 1.5498 AA. The monochromators will be rotated by 14.3078 degrees. Target wavelength is 1.5498 AA. The monochromators will be rotated by 14.3078 degrees. Target wavelength is 1.5498 AA. The monochromators will be rotated by 14.3078 degrees. Target wavelength is 1.5498 AA. The monochromators will be rotated by 14.3078 degrees. Target wavelength is 1.5498 AA. The monochromators will be rotated by 14.3078 degrees. Target wavelength is 1.5498 AA. The monochromators will be rotated by 14.3078 degrees. Target wavelength is 1.5498 AA. The monochromators will be rotated by 14.3078 degrees. Target wavelength is 1.5498 AA. The monochromators will be rotated by 14.3078 degrees. [ESRF_ID01] Initialize [ESRF_ID01] Initialize [ESRF_ID01] Initialize [ESRF_ID01] Initialize [ESRF_ID01] Initialize [ESRF_ID01] Initialize [ESRF_ID01] Initialize [ESRF_ID01] Initialize [ESRF_ID01] Initialize [ESRF_ID01] Initialize [ESRF_ID01] Initialize [ESRF_ID01] Initialize Opening input file '/home/nexmap/pkwi/McXtrace/mcxtrace/1.x-dev/tools/Python/mxrun/../mccodelib/../../../data/Si.txt' (Table_Read_Offset) [ESRF_ID01] Initialize [ESRF_ID01] Initialize [ESRF_ID01] Initialize [ESRF_ID01] Initialize Target wavelength is 1.5498 AA. The monochromators will be rotated by 14.3078 degrees. Target wavelength is 1.5498 AA. The monochromators will be rotated by 14.3078 degrees. Target wavelength is 1.5498 AA. The monochromators will be rotated by 14.3078 degrees. Target wavelength is 1.5498 AA. The monochromators will be rotated by 14.3078 degrees. Opening input file '/home/nexmap/pkwi/McXtrace/mcxtrace/1.x-dev/tools/Python/mxrun/../mccodelib/../../../data/FormFactors.txt' (Table_Read_Offset) Opening input file '/home/nexmap/pkwi/McXtrace/mcxtrace/1.x-dev/tools/Python/mxrun/../mccodelib/../../../data/polycrystal_1layer_2orts.map' (Table_Read_Offset) mccompcurname: Rebinning MaterialDatafile data (Si.txt) for faster tracing. mccompcurname: Rebinning MaterialDatafile data (Si.txt) for faster tracing. mccompcurname: Rebinning MaterialDatafile data (Si.txt) for faster tracing. mccompcurname: Rebinning MaterialDatafile data (Si.txt) for faster tracing. mccompcurname: Rebinning MaterialDatafile data (Si.txt) for faster tracing. mccompcurname: Rebinning MaterialDatafile data (Si.txt) for faster tracing. Opening input file '/home/nexmap/pkwi/McXtrace/mcxtrace/1.x-dev/tools/Python/mxrun/../mccodelib/../../../data/stretch_2orts.orts' (Table_Read_Offset) mccompcurname: Rebinning MaterialDatafile data (Si.txt) for faster tracing. mccompcurname: Rebinning MaterialDatafile data (Si.txt) for faster tracing. mccompcurname: Rebinning MaterialDatafile data (Si.txt) for faster tracing. WARNING: (Table_Rebin): Rebinning table from Si.txt would exceed 1M rows. Skipping. Sample: 6 reflections found in GeReduced.lau. Sample: 2 different orientations found in stretch_2orts.orts. Sample: 441 voxels organised in a 21 by 21 by 1-grid found in polycrystal_1layer_2orts.map. Sample: The voxels of the polycrystals have dimensions of 9.52381e-06 m by 9.52381e-06 m by 5e-05 m. Sample: Volume of unit cell is 181.12 AA^3. WARNING: (Table_Rebin): Rebinning table from Si.txt would exceed 1M rows. Skipping. Sample: 6 reflections found in GeReduced.lau. Sample: 2 different orientations found in stretch_2orts.orts. Sample: 441 voxels organised in a 21 by 21 by 1-grid found in polycrystal_1layer_2orts.map. Sample: The voxels of the polycrystals have dimensions of 9.52381e-06 m by 9.52381e-06 m by 5e-05 m. Sample: Volume of unit cell is 181.12 AA^3. WARNING: (Table_Rebin): Rebinning table from Si.txt would exceed 1M rows. Skipping. Sample: 6 reflections found in GeReduced.lau. Sample: 2 different orientations found in stretch_2orts.orts. Sample: 441 voxels organised in a 21 by 21 by 1-grid found in polycrystal_1layer_2orts.map. Sample: The voxels of the polycrystals have dimensions of 9.52381e-06 m by 9.52381e-06 m by 5e-05 m. Sample: Volume of unit cell is 181.12 AA^3. WARNING: (Table_Rebin): Rebinning table from Si.txt would exceed 1M rows. Skipping. Sample: 6 reflections found in GeReduced.lau. Sample: 2 different orientations found in stretch_2orts.orts. Sample: 441 voxels organised in a 21 by 21 by 1-grid found in polycrystal_1layer_2orts.map. Sample: The voxels of the polycrystals have dimensions of 9.52381e-06 m by 9.52381e-06 m by 5e-05 m. Sample: Volume of unit cell is 181.12 AA^3. WARNING: (Table_Rebin): Rebinning table from Si.txt would exceed 1M rows. Skipping. Sample: 6 reflections found in GeReduced.lau. Sample: 2 different orientations found in stretch_2orts.orts. Sample: 441 voxels organised in a 21 by 21 by 1-grid found in polycrystal_1layer_2orts.map. Sample: The voxels of the polycrystals have dimensions of 9.52381e-06 m by 9.52381e-06 m by 5e-05 m. Sample: Volume of unit cell is 181.12 AA^3. WARNING: (Table_Rebin): Rebinning table from Si.txt would exceed 1M rows. Skipping. Sample: 6 reflections found in GeReduced.lau. Sample: 2 different orientations found in stretch_2orts.orts. Sample: 441 voxels organised in a 21 by 21 by 1-grid found in polycrystal_1layer_2orts.map. Sample: The voxels of the polycrystals have dimensions of 9.52381e-06 m by 9.52381e-06 m by 5e-05 m. Sample: Volume of unit cell is 181.12 AA^3. mccompcurname: Rebinning MaterialDatafile data (Si.txt) for faster tracing. mccompcurname: Rebinning MaterialDatafile data (Si.txt) for faster tracing. mccompcurname: Rebinning MaterialDatafile data (Si.txt) for faster tracing. mccompcurname: Rebinning MaterialDatafile data (Si.txt) for faster tracing. Opening input file '/home/nexmap/pkwi/McXtrace/mcxtrace/1.x-dev/tools/Python/mxrun/../mccodelib/../../../data/GeReduced.lau' (Table_Read_Offset) mccompcurname: Rebinning MaterialDatafile data (Si.txt) for faster tracing. Opening input file '/home/nexmap/pkwi/McXtrace/mcxtrace/1.x-dev/tools/Python/mxrun/../mccodelib/../../../data/GeReduced.lau' (Table_Read_Offset) mccompcurname: Rebinning MaterialDatafile data (Si.txt) for faster tracing. WARNING: (Table_Rebin): Rebinning table from Si.txt would exceed 1M rows. Skipping. Sample: 6 reflections found in GeReduced.lau. Sample: 2 different orientations found in stretch_2orts.orts. Sample: 441 voxels organised in a 21 by 21 by 1-grid found in polycrystal_1layer_2orts.map. Sample: The voxels of the polycrystals have dimensions of 9.52381e-06 m by 9.52381e-06 m by 5e-05 m. Sample: Volume of unit cell is 181.12 AA^3. WARNING: (Table_Rebin): Rebinning table from Si.txt would exceed 1M rows. Skipping. Sample: 6 reflections found in GeReduced.lau. Sample: 2 different orientations found in stretch_2orts.orts. Sample: 441 voxels organised in a 21 by 21 by 1-grid found in polycrystal_1layer_2orts.map. Sample: The voxels of the polycrystals have dimensions of 9.52381e-06 m by 9.52381e-06 m by 5e-05 m. Sample: Volume of unit cell is 181.12 AA^3. WARNING: (Table_Rebin): Rebinning table from Si.txt would exceed 1M rows. Skipping. Sample: 6 reflections found in GeReduced.lau. Sample: 2 different orientations found in stretch_2orts.orts. Sample: 441 voxels organised in a 21 by 21 by 1-grid found in polycrystal_1layer_2orts.map. Sample: The voxels of the polycrystals have dimensions of 9.52381e-06 m by 9.52381e-06 m by 5e-05 m. Sample: Volume of unit cell is 181.12 AA^3. WARNING: (Table_Rebin): Rebinning table from Si.txt would exceed 1M rows. Skipping. Sample: 6 reflections found in GeReduced.lau. Sample: 2 different orientations found in stretch_2orts.orts. Sample: 441 voxels organised in a 21 by 21 by 1-grid found in polycrystal_1layer_2orts.map. Sample: The voxels of the polycrystals have dimensions of 9.52381e-06 m by 9.52381e-06 m by 5e-05 m. Sample: Volume of unit cell is 181.12 AA^3. WARNING: (Table_Rebin): Rebinning table from Si.txt would exceed 1M rows. Skipping. Sample: 6 reflections found in GeReduced.lau. Sample: 2 different orientations found in stretch_2orts.orts. Sample: 441 voxels organised in a 21 by 21 by 1-grid found in polycrystal_1layer_2orts.map. Sample: The voxels of the polycrystals have dimensions of 9.52381e-06 m by 9.52381e-06 m by 5e-05 m. Sample: Volume of unit cell is 181.12 AA^3. WARNING: (Table_Rebin): Rebinning table from Si.txt would exceed 1M rows. Skipping. Sample: 6 reflections found in GeReduced.lau. Sample: 2 different orientations found in stretch_2orts.orts. Sample: 441 voxels organised in a 21 by 21 by 1-grid found in polycrystal_1layer_2orts.map. Sample: The voxels of the polycrystals have dimensions of 9.52381e-06 m by 9.52381e-06 m by 5e-05 m. Sample: Volume of unit cell is 181.12 AA^3. Opening input file '/home/nexmap/pkwi/McXtrace/mcxtrace/1.x-dev/tools/Python/mxrun/../mccodelib/../../../data/GeReduced.lau' (Table_Read_Offset) WARNING: (Table_Rebin): Rebinning table from Si.txt would exceed 1M rows. Skipping. Sample: 6 reflections found in GeReduced.lau. Sample: 2 different orientations found in stretch_2orts.orts. Sample: 441 voxels organised in a 21 by 21 by 1-grid found in polycrystal_1layer_2orts.map. Sample: The voxels of the polycrystals have dimensions of 9.52381e-06 m by 9.52381e-06 m by 5e-05 m. Sample: Volume of unit cell is 181.12 AA^3. WARNING: (Table_Rebin): Rebinning table from Si.txt would exceed 1M rows. Skipping. Sample: 6 reflections found in GeReduced.lau. Sample: 2 different orientations found in stretch_2orts.orts. Sample: 441 voxels organised in a 21 by 21 by 1-grid found in polycrystal_1layer_2orts.map. Sample: The voxels of the polycrystals have dimensions of 9.52381e-06 m by 9.52381e-06 m by 5e-05 m. Sample: Volume of unit cell is 181.12 AA^3. WARNING: (Table_Rebin): Rebinning table from Si.txt would exceed 1M rows. Skipping. Sample: 6 reflections found in GeReduced.lau. Sample: 2 different orientations found in stretch_2orts.orts. Sample: 441 voxels organised in a 21 by 21 by 1-grid found in polycrystal_1layer_2orts.map. Sample: The voxels of the polycrystals have dimensions of 9.52381e-06 m by 9.52381e-06 m by 5e-05 m. Sample: Volume of unit cell is 181.12 AA^3. mccompcurname: Rebinning MaterialDatafile data (Si.txt) for faster tracing. WARNING: (Table_Rebin): Rebinning table from Si.txt would exceed 1M rows. Skipping. Sample: 6 reflections found in GeReduced.lau. Sample: 2 different orientations found in stretch_2orts.orts. Sample: 441 voxels organised in a 21 by 21 by 1-grid found in polycrystal_1layer_2orts.map. Sample: The voxels of the polycrystals have dimensions of 9.52381e-06 m by 9.52381e-06 m by 5e-05 m. Sample: Volume of unit cell is 181.12 AA^3. Finally [ESRF_ID01: 3]. Time: 9 [s] Finally [ESRF_ID01: 3]. Time: 9 [s] Finally [ESRF_ID01: 3]. Time: 9 [s] Finally [ESRF_ID01: 3]. Time: 9 [s] Finally [ESRF_ID01: 3]. Time: 9 [s] Save [ESRF_ID01] Detector: DivergenceMonitor_I=3.38944e-05 DivergenceMonitor_ERR=8.99384e-08 DivergenceMonitor_N=2.55477e+06 "DivMonitor.dat" Detector: EnergyMonitor_I=3.38944e-05 EnergyMonitor_ERR=8.99384e-08 EnergyMonitor_N=2.55477e+06 "EnergyMonitor.dat" Detector: PSDMonitor_I=3.38944e-05 PSDMonitor_ERR=8.99384e-08 PSDMonitor_N=2.55477e+06 "PSDMonitor.dat" Finally [ESRF_ID01: 3]. Time: 9 [s] Finally [ESRF_ID01: 3]. Time: 9 [s] Finally [ESRF_ID01: 3]. Time: 9 [s] Finally [ESRF_ID01: 3]. Time: 9 [s] Finally [ESRF_ID01: 3]. Time: 9 [s] Finally [ESRF_ID01: 3]. Time: 9 [s] Finally [ESRF_ID01: 3]. Time: 9 [s] Finally [ESRF_ID01: 3]. Time: 9 [s] Finally [ESRF_ID01: 3]. Time: 9 [s] Finally [ESRF_ID01: 3]. Time: 9 [s] Detector: MAXIPix_I=2.10585e-06 MAXIPix_ERR=1.15157e-08 MAXIPix_N=1.41388e+06 "DetectorMaxiPix.mcp" Finally [ESRF_ID01: 3]. Time: 9 [s] INFO: Placing instr file copy /home/nexmap/pkwi/xTESTS/2022-08-01/McXtrace-1.x_CPU_MPICC_5e7/ESRF_ID01/ESRF_ID01.instr in dataset 3