INFO: No output directory specified (--dir) INFO: Using directory: "XFEL_SPB_20220106_003325" INFO: Regenerating c-file: XFEL_SPB.c DEBUG: CMD: mcxtrace -t -o ./XFEL_SPB.c /zhome/7c/9/7041/TESTS/2022-01-06/McXtrace-1.5_CPU_MPICC_1e7/XFEL_SPB/XFEL_SPB.instr Warning: 'Perfect_crystal' is an obsolete component (not maintained). Warning: Component Origin=Progress_bar(string profile) definition parameter may be changed into a setting parameter to avoid warnings at compile time. Warning: Component src=Source_gaussian(string spectrum_file) definition parameter may be changed into a setting parameter to avoid warnings at compile time. Warning: Component emon0=E_monitor(string filename) definition parameter may be changed into a setting parameter to avoid warnings at compile time. Warning: Component emon_l=E_monitor(string filename) definition parameter may be changed into a setting parameter to avoid warnings at compile time. Warning: Component emon_om=E_monitor(string filename) definition parameter may be changed into a setting parameter to avoid warnings at compile time. Warning: Component emon_dm=E_monitor(string filename) definition parameter may be changed into a setting parameter to avoid warnings at compile time. Warning: Component mono1=Perfect_crystal(string form_factors) definition parameter may be changed into a setting parameter to avoid warnings at compile time. Warning: Component mono1=Perfect_crystal(string material) definition parameter may be changed into a setting parameter to avoid warnings at compile time. Warning: Component mono2=Perfect_crystal(string form_factors) definition parameter may be changed into a setting parameter to avoid warnings at compile time. Warning: Component mono2=Perfect_crystal(string material) definition parameter may be changed into a setting parameter to avoid warnings at compile time. Warning: Component emon_dcm=E_monitor(string filename) definition parameter may be changed into a setting parameter to avoid warnings at compile time. Warning: Component emon_sample=E_monitor(string filename) definition parameter may be changed into a setting parameter to avoid warnings at compile time. CFLAGS= INFO: Recompiling: ./XFEL_SPB.out DEBUG: CMD: mpicc -o ./XFEL_SPB.out ./XFEL_SPB.c -lm -DUSE_MPI -lmpi -std=c99 -g -lm -O2 -DUSE_MPI -lmpi mccode-r.c: In function ‘sighandler’: mccode-r.c:3719:5: warning: implicit declaration of function ‘kill’ [-Wimplicit-function-declaration] INFO: === loading system configuration loading override configuration from /zhome/7c/9/7041/McXtrace/mcxtrace/1.5/tools/Python/mctest/../mccodelib/mcxtrace-test/McXtrace-1.5_CPU_MPICC/mccode_config.json