INFO: Using directory: "1"
INFO: Using existing c-file: ./Test_Absorption.c
INFO: Using existing binary: ./Test_Absorption.out
WARNING: Ignoring invalid parameter: "Test_Absorption.instr"
INFO: ===
Simulation 'Test_Absorption' (/home/nexmap/pkwi/xTESTS/2023-12-20/McXtrace_CPU_MPICC_KISS_5e7/Test_Absorption/Test_Absorption.instr): running on 16 nodes (master is 'elearn1.fysik.dtu.dk', MPI version 3.1).
[Test_Absorption] Initialize
[Test_Absorption] Initialize
[Test_Absorption] Initialize
[Test_Absorption] Initialize
[Test_Absorption] Initialize
[Test_Absorption] Initialize
[Test_Absorption] Initialize
[Test_Absorption] Initialize
[Test_Absorption] Initialize
[Test_Absorption] Initialize
[Test_Absorption] Initialize
Opening input file '/home/nexmap/pkwi/McXtrace/mcxtrace/3.x-dev/data/Mn.txt' (Table_Read_Offset)
[Test_Absorption] Initialize
[Test_Absorption] Initialize
[Test_Absorption] Initialize
[Test_Absorption] Initialize
[Test_Absorption] Initialize
WARNING: (Table_Rebin): Rebinning table from Mn.txt would exceed 1M rows. Skipping.
Warning: sample_scan2: Invalid inner volume specification. Ignoring.
WARNING: (Table_Rebin): Rebinning table from Mn.txt would exceed 1M rows. Skipping.
Warning: sample_scan2: Invalid inner volume specification. Ignoring.
WARNING: (Table_Rebin): Rebinning table from Mn.txt would exceed 1M rows. Skipping.
Warning: sample_scan2: Invalid inner volume specification. Ignoring.
WARNING: (Table_Rebin): Rebinning table from Mn.txt would exceed 1M rows. Skipping.
Warning: sample_scan2: Invalid inner volume specification. Ignoring.
WARNING: (Table_Rebin): Rebinning table from Mn.txt would exceed 1M rows. Skipping.
Warning: sample_scan2: Invalid inner volume specification. Ignoring.
WARNING: (Table_Rebin): Rebinning table from Mn.txt would exceed 1M rows. Skipping.
Warning: sample_scan2: Invalid inner volume specification. Ignoring.
WARNING: (Table_Rebin): Rebinning table from Mn.txt would exceed 1M rows. Skipping.
Warning: sample_scan2: Invalid inner volume specification. Ignoring.
sample_scan1: Rebinning material data (Mn.txt) for faster tracing...done
INFO: sample_scan2: Setting rho_o=7.43 from Mn.txt
sample_scan1: Rebinning material data (Mn.txt) for faster tracing...done
INFO: sample_scan2: Setting rho_o=7.43 from Mn.txt
sample_scan1: Rebinning material data (Mn.txt) for faster tracing...done
INFO: sample_scan2: Setting rho_o=7.43 from Mn.txt
sample_scan1: Rebinning material data (Mn.txt) for faster tracing...done
INFO: sample_scan2: Setting rho_o=7.43 from Mn.txt
sample_scan1: Rebinning material data (Mn.txt) for faster tracing...done
INFO: sample_scan2: Setting rho_o=7.43 from Mn.txt
sample_scan1: Rebinning material data (Mn.txt) for faster tracing...done
INFO: sample_scan2: Setting rho_o=7.43 from Mn.txt
sample_scan1: Rebinning material data (Mn.txt) for faster tracing...done
INFO: sample_scan2: Setting rho_o=7.43 from Mn.txt
sample_scan1: Rebinning material data (Mn.txt) for faster tracing...done
INFO: sample_scan2: Setting rho_o=7.43 from Mn.txt
sample_scan1: Rebinning material data (Mn.txt) for faster tracing...done
INFO: sample_scan2: Setting rho_o=7.43 from Mn.txt
WARNING: (Table_Rebin): Rebinning table from Mn.txt would exceed 1M rows. Skipping.
Warning: sample_scan2: Invalid inner volume specification. Ignoring.
WARNING: (Table_Rebin): Rebinning table from Mn.txt would exceed 1M rows. Skipping.
Warning: sample_scan2: Invalid inner volume specification. Ignoring.
WARNING: (Table_Rebin): Rebinning table from Mn.txt would exceed 1M rows. Skipping.
Warning: sample_scan2: Invalid inner volume specification. Ignoring.
WARNING: (Table_Rebin): Rebinning table from Mn.txt would exceed 1M rows. Skipping.
Warning: sample_scan2: Invalid inner volume specification. Ignoring.
WARNING: (Table_Rebin): Rebinning table from Mn.txt would exceed 1M rows. Skipping.
Warning: sample_scan2: Invalid inner volume specification. Ignoring.
WARNING: (Table_Rebin): Rebinning table from Mn.txt would exceed 1M rows. Skipping.
Warning: sample_scan2: Invalid inner volume specification. Ignoring.
WARNING: (Table_Rebin): Rebinning table from Mn.txt would exceed 1M rows. Skipping.
Warning: sample_scan2: Invalid inner volume specification. Ignoring.
sample_scan1: Rebinning material data (Mn.txt) for faster tracing...done
INFO: sample_scan2: Setting rho_o=7.43 from Mn.txt
sample_scan1: Rebinning material data (Mn.txt) for faster tracing...done
Reusing input file 'Mn.txt' (Table_Read_Offset)
INFO: sample_scan2: Setting rho_o=7.43 from Mn.txt
Reusing input file 'Mn.txt' (Table_Read_Offset)
Loading geometry file (OFF/PLY): cube.off
sample_scan1: Rebinning material data (Mn.txt) for faster tracing...done
INFO: sample_scan2: Setting rho_o=7.43 from Mn.txt
sample_scan1: Rebinning material data (Mn.txt) for faster tracing...done
INFO: sample_scan2: Setting rho_o=7.43 from Mn.txt
sample_scan1: Rebinning material data (Mn.txt) for faster tracing...done
INFO: sample_scan2: Setting rho_o=7.43 from Mn.txt
sample_scan1: Rebinning material data (Mn.txt) for faster tracing...done
INFO: sample_scan2: Setting rho_o=7.43 from Mn.txt
sample_scan1: Rebinning material data (Mn.txt) for faster tracing...done
INFO: sample_scan2: Setting rho_o=7.43 from Mn.txt
WARNING: (Table_Rebin): Rebinning table from Mn.txt would exceed 1M rows. Skipping.
Warning: sample_scan2: Invalid inner volume specification. Ignoring.
WARNING: (Table_Rebin): Rebinning table from Mn.txt would exceed 1M rows. Skipping.
Warning: sample_scan2: Invalid inner volume specification. Ignoring.
sample_scan3: Volume[1], material='Mn.txt' geometry='cube.off'
sample_scan3: Volume[1], material='Mn.txt' geometry='cube.off'
sample_scan3: Volume[1], material='Mn.txt' geometry='cube.off'
sample_scan3: Volume[1], material='Mn.txt' geometry='cube.off'
sample_scan3: Volume[1], material='Mn.txt' geometry='cube.off'
sample_scan3: Volume[1], material='Mn.txt' geometry='cube.off'
sample_scan3: Volume[1], material='Mn.txt' geometry='cube.off'
sample_scan3: Volume[1], material='Mn.txt' geometry='cube.off'
sample_scan3: Volume[1], material='Mn.txt' geometry='cube.off'
  Number of vertices: 8
  Number of polygons: 6
Warning: Aspect ratio of the geometry cube.off was modified.
         If you want to keep the original proportions, specifiy only one of the dimensions.
  Bounding box dimensions for geometry cube.off:
    Length=0.001000 (0.100%)
    Width= 0.001000 (0.100%)
    Depth= 0.000100 (0.010%)
sample_scan3: Volume[1], material='Mn.txt' geometry='cube.off'
sample_scan3: Volume[1], material='Mn.txt' geometry='cube.off'
sample_scan3: Volume[1], material='Mn.txt' geometry='cube.off'
sample_scan3: Volume[1], material='Mn.txt' geometry='cube.off'
sample_scan3: Volume[1], material='Mn.txt' geometry='cube.off'
sample_scan3: Volume[1], material='Mn.txt' geometry='cube.off'
sample_scan3: Volume[1], material='Mn.txt' geometry='cube.off'
sample_scan4: Material Mn mass fractions:
  |  1e+02 %: Z= 25  Mn     54.9 [g/mol]     7.44 [g/cm3]
sample_scan4: Material Mn M=54.94 [g/mol] density=7.44 [g/cm3] rho=0.0815521 [at/Angs-3]
*** TRACE end *** 

Save [Test_Absorption]
Detector: emon_I=8.21262e-12 emon_ERR=5.8717e-15 emon_N=5.20181e+06 "emon.dat"

Finally [Test_Absorption: 1]. Time: 3 [s] 
sample_scan4: scattered intensity: fluo=0 Compton=0 Rayleigh=0

Finally [Test_Absorption: 1]. Time: 3 [s] 
sample_scan4: scattered intensity: fluo=0 Compton=0 Rayleigh=0
Detector: psd_I=8.67712e-09 psd_ERR=1.85437e-12 psd_N=4.39458e+07 "psd.dat"

Finally [Test_Absorption: 1]. Time: 3 [s] 
sample_scan4: scattered intensity: fluo=0 Compton=0 Rayleigh=0

Finally [Test_Absorption: 1]. Time: 3 [s] 
sample_scan4: scattered intensity: fluo=0 Compton=0 Rayleigh=0

Finally [Test_Absorption: 1]. Time: 3 [s] 
sample_scan4: scattered intensity: fluo=0 Compton=0 Rayleigh=0

Finally [Test_Absorption: 1]. Time: 3 [s] 
sample_scan4: scattered intensity: fluo=0 Compton=0 Rayleigh=0

Finally [Test_Absorption: 1]. Time: 3 [s] 
sample_scan4: scattered intensity: fluo=0 Compton=0 Rayleigh=0

Finally [Test_Absorption: 1]. Time: 3 [s] 
sample_scan4: scattered intensity: fluo=0 Compton=0 Rayleigh=0

Finally [Test_Absorption: 1]. Time: 3 [s] 
sample_scan4: scattered intensity: fluo=0 Compton=0 Rayleigh=0

Finally [Test_Absorption: 1]. Time: 3 [s] 
sample_scan4: scattered intensity: fluo=0 Compton=0 Rayleigh=0

Finally [Test_Absorption: 1]. Time: 3 [s] 
sample_scan4: scattered intensity: fluo=0 Compton=0 Rayleigh=0

Finally [Test_Absorption: 1]. Time: 3 [s] 
sample_scan4: scattered intensity: fluo=0 Compton=0 Rayleigh=0

Finally [Test_Absorption: 1]. Time: 3 [s] 
sample_scan4: scattered intensity: fluo=0 Compton=0 Rayleigh=0

Finally [Test_Absorption: 1]. Time: 3 [s] 
sample_scan4: scattered intensity: fluo=0 Compton=0 Rayleigh=0

Finally [Test_Absorption: 1]. Time: 3 [s] 
sample_scan4: scattered intensity: fluo=0 Compton=0 Rayleigh=0

Finally [Test_Absorption: 1]. Time: 3 [s] 
sample_scan4: scattered intensity: fluo=0 Compton=0 Rayleigh=0
INFO: Placing instr file copy /home/nexmap/pkwi/xTESTS/2023-12-20/McXtrace_CPU_MPICC_KISS_5e7/Test_Absorption/Test_Absorption.instr in dataset 1